AMCG00008812


Basic Information

Item Value
gene id AMCG00008812
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12468816 ~ 12469543 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008812
ATGAGTTCGTACGTCGCCAACTCGTTTTACAAGCAAACCCATGAGACTCCTGCTTACACTATGCACGGCTATGGGAACTATGGATCTGTCTCTGAGCTGCACCCGTCCAGGTACTGTTACGGAGGGCTGGACCTCAGCGTCTCCTTCCCTTCGCCGGCCTCTTCCAACTCCCTCAACCGTGGGGAGATGAGCGCTAGCCTGCGCGGCAGCCCGGACTCGCAGCCaccgccgcctcctcctcctccaccgcCGCCGCCACCGCCGCCGCCTTGCTCCGCCGTGGGCTCCCCGAGAAGGGCTCTGAGCGCCGGCGGCCAGGGCTCCCTCTCCGGCGGGCTGTTCTGTCAGAAAGCCGAGGGGGACATGGATCTTAACGACAAGCCCGGCAGTAACAGCAGAGCCGGCGAGATCAAAGTGGAAGCAGTCCAGCCGGCCGTacgggggaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008812 True 450 mRNA 0.64 2 12468816 12469543

Neighbor

gene id symbol gene type direction distance location
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding upstream 3194 12463038 ~ 12465622 (+)
AMCG00008806 hoxc8,hoxc8ab coding upstream 33753 12434623 ~ 12435063 (+)
AMCG00008807 NA coding upstream 45410 12422714 ~ 12423406 (+)
AMCG00008809 NA coding upstream 53711 12399412 ~ 12415105 (+)
AMCG00008808 hoxc11,hoxc11a,LOC108433364 coding upstream 82514 12385580 ~ 12386302 (+)
AMCG00008811 hoxc4 coding downstream 34713 12504256 ~ 12505029 (+)
AMCG00008819 NA coding downstream 99485 12569028 ~ 12569687 (+)
AMCG00008814 hnrnpa1 coding downstream 185024 12654567 ~ 12659732 (+)
AMCG00008813 NA coding downstream 191236 12660779 ~ 12662451 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding downstream 218654 12688197 ~ 12693501 (+)
G51673 NA non-coding upstream 29293 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 42594 12425933 ~ 12426222 (+)
G51614 NA non-coding upstream 218907 12190733 ~ 12249909 (+)
G51586 NA non-coding upstream 388612 12078697 ~ 12080204 (+)
G51584 NA non-coding upstream 391303 12075488 ~ 12077513 (+)
G51685 NA non-coding downstream 34373 12503916 ~ 12504176 (+)
G51710 NA non-coding downstream 89928 12559471 ~ 12559699 (+)
G51718 NA non-coding downstream 176980 12646523 ~ 12647964 (+)
G51735 NA non-coding downstream 251539 12721082 ~ 12722980 (+)
G51736 NA non-coding downstream 269654 12739197 ~ 12745766 (+)
AMCG00008784 NA other upstream 764403 11694654 ~ 11704413 (+)
G51445 NA other upstream 1003328 11460363 ~ 11465488 (+)
G51297 NA other upstream 1428142 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1622380 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 1697141 10692377 ~ 10771675 (+)
AMCG00008810 NA other downstream 70055 12539598 ~ 12549618 (+)
G51734 NA other downstream 245951 12715494 ~ 12716786 (+)
G51756 NA other downstream 373172 12842715 ~ 12846233 (+)
G51812 NA other downstream 455695 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 511261 12980804 ~ 12992725 (+)

Expression


Co-expression Network