AMCG00008813


Basic Information

Item Value
gene id AMCG00008813
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12660779 ~ 12662451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008813
cctccttcccccccccccccaaacacaccaCTAAGGTCTTGACTAGAGAAAGCCAGCAAGCCTCTGTCTTGGCTTGGGAACCTGATTTTTCTTCCAACGGACAAGGACTTAATTCAGGAAGGCTCATTCCGCCACTAGAAGGATTTAGTTCCTTTCTGAGCCACGACCAAGGCTAGCTTACATGCGTTACTTGAGCCTAGCCATGGGAGCCAGCTGAGGGAGAGAAGTAGCAAGAGATCATCGCAAGGAGCCAGAGAAGCAGGGGAAAGTCTTTTTTGAGTACAGAAGGTTGCTCTAATGAGACTAGCAGAGTCAGCAGCTACGAAAGGGGTATTTGTATACCATGCTAGTAGGTAAGAACAGACTTTTCaacttgtatttttgtttgatatttttccTATTTCTTCTCTAAATGTAAAACTAATCAATGAGTCTATCCTAGTAAGTTGCTCAGTCCAGGGTTTGTGTCAGCCAGCAAGGTTTAATTTTGCTCTTAAGTGGAGTAATCTCAAGGGTTCCACCTTCCTGATTTGTTAACTGCATACAGACATGGACCCTTTATTTTGAGCAAAAATTGAAAGACTAGGGCAGCTGAGATTCTTGCATTGCAGAATTCCTGGGGGAGTATTTGTGTCAAAAGCAGAATTTGGCAACCACCACTTTTCAGGGGTTGGtttgggggggaagggggcgTTATTTGTTTTGCCTGGTTGATGCAAACCCGGACTGTTAGgggatgtttttgtgtttgaggGTTCACTTTAAGGACCTGGATGCATGTTGAGCTTAATGTTTAAAAACCCTCATCTCCTCTTGTAAGCCTTGCAGGCCAATACATTATAGAACATGGCATAAATGTACCTTTTAGGTAGAGACCTTTCCAGTAACCGCATGGATTTGCAACGCTGGCCGTTGGTGTTGCTGTTCGTCCAAATTAAACCTCGTGTCGAGCTCTGCAGTAATGCATGCAGGAGGCGTTTCTGTGAGGACTAGTAGACGTACAAACTCAGTCCTTATTTGGCCTCGTCATTTTCCAGTTTGTACTTCAGACAACCTCCCGCCCTGCCCCTCTAGACAGAGTGGGATTTATAGAATAGCAGAGTAGTAGTGTCCAGTTGTAGCAGTCAAAGGGGCACTTCTCGCTTTATTTCCCCCCTACCAGTAACTGGTCATTCTGATTGATTTAGTTAAatttcattgtctttttaacaccctgggattttgtgtgtgtgtgtgcgcactaACCAGGCTTCTTCTCTGTTCTCAGGACTGTTGCATCATGCTAGGACCATTGGGCATGTCATTTTGCCTAAGAACGTCTCCCATGTTGAGAACTCTGAGATGACCTGCAGTGGCCAAACTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008813 True 1365 mRNA 0.45 2 12660779 12662451

Neighbor

gene id symbol gene type direction distance location
AMCG00008814 hnrnpa1 coding upstream 1047 12654567 ~ 12659732 (+)
AMCG00008819 NA coding upstream 91092 12569028 ~ 12569687 (+)
AMCG00008811 hoxc4 coding upstream 155750 12504256 ~ 12505029 (+)
AMCG00008812 NA coding upstream 191236 12468816 ~ 12469543 (+)
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding upstream 195157 12463038 ~ 12465622 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding downstream 25746 12688197 ~ 12693501 (+)
AMCG00008825 NA coding downstream 140818 12803269 ~ 12810428 (+)
AMCG00008824 NA coding downstream 158347 12820798 ~ 12840200 (+)
AMCG00008828 NA coding downstream 228551 12891002 ~ 12895612 (+)
AMCG00008830 pip4k2c,LOC103385206 coding downstream 237444 12899895 ~ 12907881 (+)
G51718 NA non-coding upstream 12815 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 101080 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 156603 12503916 ~ 12504176 (+)
G51673 NA non-coding upstream 221256 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 234557 12425933 ~ 12426222 (+)
G51735 NA non-coding downstream 58631 12721082 ~ 12722980 (+)
G51736 NA non-coding downstream 76746 12739197 ~ 12745766 (+)
G51796 NA non-coding downstream 233898 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 265167 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 316413 12978864 ~ 12980775 (+)
AMCG00008810 NA other upstream 111161 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 956366 11694654 ~ 11704413 (+)
G51445 NA other upstream 1195291 11460363 ~ 11465488 (+)
G51297 NA other upstream 1620105 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1814343 10828568 ~ 10846436 (+)
G51734 NA other downstream 53043 12715494 ~ 12716786 (+)
G51756 NA other downstream 180264 12842715 ~ 12846233 (+)
G51812 NA other downstream 262787 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 318353 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 559869 13222320 ~ 13224946 (+)

Expression


Co-expression Network