AMCG00008819


Basic Information

Item Value
gene id AMCG00008819
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12569028 ~ 12569687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008819
ATGAACGCGTACCCAGAGATAGTGTGCGGAGCGGAGCCCGGCGCTCCCTACGCGGGGGGATACCCGGAGGCCCGGCTTCAGCATCTGGACCAGAGACCTTATTCGAAAGTGAGCTGTGGCGGAGAAGGACGTTACGTGGTGGGCACGGATTTCGCCTTGCATCGCCGGGTCTCACCTTTCCCCTGCAGCGGCGCCCTCAACCCCCCTCCggctcccactcccactccatCTGCCCCTCAGCATCCCGGGTTCTCCGGCACGAACACTTTCCACGCCGGCAGTCTTCACGTCACTTTCAGTCCCGGGACACCTGCTAGAGCCTCCTTCACCCACAGCCAGGGATACCCCTCCCAGCCGGCCTACCTCCACCATGCCCACCCGCACTCCTGCACAAACTCCCAGGACCTGGATTACACCGGGACTGGGTATCCCGTCAGCGCCGACCCTCCGGTGACCTTTTCCGTGCTCCACCCCCGGCTTGGGACGCTGGATCATCCCTACCAGTCGTGCGCTCAGGAAGGGTCGAGGTTACCTCTTCCTGAATGCCCATCGGAGGACGGAGACAACCCCCGGCTGGACACCGGCTACAGCAGCAAAACATTCGACTGGATGAAAGTGAAGCGAAACCCTCCCAGGATTGGTAAGGAAGTTTCTgattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008819 True 660 mRNA 0.62 1 12569028 12569687

Neighbor

gene id symbol gene type direction distance location
AMCG00008811 hoxc4 coding upstream 63999 12504256 ~ 12505029 (+)
AMCG00008812 NA coding upstream 99485 12468816 ~ 12469543 (+)
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding upstream 103406 12463038 ~ 12465622 (+)
AMCG00008806 hoxc8,hoxc8ab coding upstream 133965 12434623 ~ 12435063 (+)
AMCG00008807 NA coding upstream 145622 12422714 ~ 12423406 (+)
AMCG00008814 hnrnpa1 coding downstream 84880 12654567 ~ 12659732 (+)
AMCG00008813 NA coding downstream 91092 12660779 ~ 12662451 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding downstream 118510 12688197 ~ 12693501 (+)
AMCG00008825 NA coding downstream 233582 12803269 ~ 12810428 (+)
AMCG00008824 NA coding downstream 251111 12820798 ~ 12840200 (+)
G51710 NA non-coding upstream 9329 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 64852 12503916 ~ 12504176 (+)
G51673 NA non-coding upstream 129505 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 142806 12425933 ~ 12426222 (+)
G51614 NA non-coding upstream 319119 12190733 ~ 12249909 (+)
G51718 NA non-coding downstream 76836 12646523 ~ 12647964 (+)
G51735 NA non-coding downstream 151395 12721082 ~ 12722980 (+)
G51736 NA non-coding downstream 169510 12739197 ~ 12745766 (+)
G51796 NA non-coding downstream 326662 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 357931 12927618 ~ 12927845 (+)
AMCG00008810 NA other upstream 19410 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 864615 11694654 ~ 11704413 (+)
G51445 NA other upstream 1103540 11460363 ~ 11465488 (+)
G51297 NA other upstream 1528354 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1722592 10828568 ~ 10846436 (+)
G51734 NA other downstream 145807 12715494 ~ 12716786 (+)
G51756 NA other downstream 273028 12842715 ~ 12846233 (+)
G51812 NA other downstream 355551 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 411117 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 652633 13222320 ~ 13224946 (+)

Expression


Co-expression Network