AMCG00008823


Basic Information

Item Value
gene id AMCG00008823
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12725524 ~ 12735479 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008823
TGCGTTTAAAGCAGAAAGCGCAACTTAGACAGTTCGATCAAGtgttgcaaaaagaaaaaagtaaccGCCGCCCCCTCCGTCAGACATCGCGCTGCGTGGGGACCCTGCCTTTCTATTGGCCGTCGCAGCGGAGCCCGGCTGGCTCGTACTGGGAACCCATGCTGGACACTCCGCCACAATCCCAGTCAGCCCGAGTCGCACCGTAGCCATGACCGCAACAGCACCCAAACACATCAGCACTGTGGACCAGAACGGAGACTGTAGAGAGGAGAATGGGGTGGCAGTGATGCCCCCCCGGGCCAGGCCACAGCTAAATGGGATTGTTCTTGACCACGGCGAGGGGGAGAGATTCCTTAGCGATGCCTTCCAGATCATCCTGCAGGAGGCTCTGTGCAAAGGATCCGATCGACGGGAAAAGGTGTGCGAGTGGCGGGAGCCAGATGAACTGAGGGCCCTGCTGGACCTGGAGCTGCGGGAGGGCGGCGAGTCCAACGAACAGCTGCTGCGCCGGCTGTTCGCAGGGATGGATTACCACTCCCTGGCCGGACGTTTCCTCACAGAGACCCTCAATACCAGCCAgtaTACCTATGAGGTCGCCCCAGTGTTCGTGCTGATGGAGGGGGTGGTCCTATCCCAGTTGCGCACGCTAGTGGGCTGGTCGGCGGGTGACGGGATCTTCTGCCCTGGCGGCTCTATGTCCAACATGTACGCCATGAACCTGGCGCGCTACCGAGCTTTTCCGCAGGTCAAGAGACAGGGCCTGTGGGCGGTGCCACGCCTCGCAGTCTTCACTTCACAGGAGGCGCACTACTCCGTCAATAAATCTGCGTGCTTCCAGGGGATCGGGCTGGACAACGTGTTCGTGGGTGCTGTGCCATTCCTAGTGAGCGCCACATCTGGCACAACCATCCTGGGTGCCTTTGACCCACTGGACCGGCTCGCAGACGTGTGCGAGAAACACAAGCTGTGGCTGCATGTAGACGCTGCCTGGGGCGGGAGTGTGTTGTTCTCAAAGAAGCACAGACACCTGCTGAAGGGCATCGAGAGGGTAGACTCCATTTCCTGGAACCCCCATAAGATGCTGATGGCCGGGCTGCAGTGCTCAGTGTTTCTCCTCAGGGATACCACGGACCTACTGAAGCGTTGCCACTGTGCCAACGCCACCTAcctcttccagcaggacaagtTCTACGACCTGAGCTACGACACAGGGGACAAGTCAGTGCAGTGTGGCCGCAAGGTGGACTGCCTAAAGCTGTGGCTGATGTGGAAAGCTGTGGGCACGCAGGGGCTGGAGGAGCGTGTGGACAAGGCGTTCAACTGCACCAGGTATATTGTGGAGGAGTTGAAGAAACGAGAGGGCTTCCAGCTGGTCATTGAGCCCGAGTTTGTGAACGTGTGTTTCTGGTTTGTGCCTCCGAGTCTGAGAGGGCAGGAGGCCAGTGAAGACTATCAGGAGCGACTGGCCAAGGTGGCGCCCACCATTAAGGAGCGGATGGTGCGGAAGGGCAGTATGATGGTGGGGTACCAGCCTCAGCACGAGAGAGTCAACTTCTTCCGCCTGGTGCTGATCTCCCCCCAGATTTCCCAGCAGGACCTGCTCTTCTTCCTGGATGAGATTGAGAGGCTGGGCAGAGACCTCTAACTGCTGCCTGTTCACTTTAATACAccccccaccaacacacactgTTCTCTCTTCTGTCATATGGTGTTACTCCCGTTCCCTCTTTTTCATAGTTGAGGCAGACTGATTGAGAAGCTGGGCAGTAGAGAGCTCCACGTGCTCGCTTTAatctgccccccctccccctcttctctccctcccccatcctctctccctcactccttctccaccccccctccaccctcttttctctctctctctctctctctctctctctctctctctccttcaccaCCCCTCCTCCTTTTCTGCACctctttctgtctccctctACCAGAACCCCTTCCCTTTTCTTCTGGGTTGGGCAGGACAAGCCAGAGGAACGCTCCTCTGCCGCTCCCTCCATCCGTCTACCCTCCTCATCCCTTCTATTTATCTCCATCATGATTCACCTCTTCCCTGTCAGTCCCTTCTGtcacctctctctccactcaGTTTCTCTCCCATTACAACTTCTATCTCCTTCTTGCTCAAACACCCTACCCACCCCCCCATCTTGTTCCCCTTCCCCCATCCCTCtcactcccctcccccactctcATTCTGACCCCCACCCTGCACCAGCTCTCTCTTCTTTCCTTatatggagaagaaaaaaaaaactatattcagACATATTTTGTAGCAGTGGCTGGTCACACTATGTCTACGTCCAAAATGTTGTCTATGGATCTCTGAGTGAAGAATTAATTTATATGGTACAACAGGGTTTGTTAATTGCCTGAATTCAGGAAGGACCTTATTAGGAACCATTTTTAAAAGCGTAGAATGCAGTCAGCACATTTAGTATCCGTCCAAATTACCCCACTGCCTGTTAAAAACATCAGACACTTAAGCTGTGCATTTCAGTAGCTTTACTTTCTCTCCCAGCTGAACTCTGATTTGTTTGATTGGACCAATTATTTGTGAGATCAGAACAGGTCTTAGTGTTTGGTTTTCTAGATTTCTACGGACTGTctccaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008823 True 2651 mRNA 0.55 13 12725524 12735479

Neighbor

gene id symbol gene type direction distance location
AMCG00008822 NA coding downstream 4335 12717117 ~ 12721189 (-)
AMCG00008816 NA coding downstream 57092 12665835 ~ 12668432 (-)
AMCG00008818 NA coding downstream 71579 12653613 ~ 12653945 (-)
AMCG00008817 cbx5,LOC107664188,LOC107714996 coding downstream 73706 12641987 ~ 12651818 (-)
AMCG00008802 NA coding downstream 466193 12248300 ~ 12259331 (-)
AMCG00008821 NA coding upstream 3694 12739173 ~ 12745962 (-)
AMCG00008827 NA coding upstream 111528 12847007 ~ 12856225 (-)
AMCG00008826 spryd3 coding upstream 128144 12863623 ~ 12884668 (-)
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding upstream 178057 12913536 ~ 12917796 (-)
AMCG00008833 NA coding upstream 191114 12926593 ~ 12942236 (-)
G51724 NA non-coding downstream 65407 12657226 ~ 12660117 (-)
G51707 NA non-coding downstream 175907 12547400 ~ 12549617 (-)
G51706 NA non-coding downstream 185180 12539607 ~ 12540344 (-)
G51700 NA non-coding downstream 221845 12503462 ~ 12503679 (-)
G51693 NA non-coding downstream 249325 12454919 ~ 12476199 (-)
G51809 NA non-coding upstream 171842 12907321 ~ 12908333 (-)
G51811 NA non-coding upstream 185066 12920545 ~ 12920791 (-)
G51851 NA non-coding upstream 187725 12923204 ~ 12924656 (-)
G51875 NA non-coding upstream 286545 13022024 ~ 13023104 (-)
G51946 NA non-coding upstream 433951 13169430 ~ 13213278 (-)
AMCG00008815 NA other downstream 120264 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1399165 11235642 ~ 11326359 (-)
G51250 NA other downstream 1926370 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 2007323 10670949 ~ 10718201 (-)
G51797 NA other upstream 155332 12890811 ~ 12891597 (-)
G51799 NA other upstream 159856 12895335 ~ 12897134 (-)
G51867 NA other upstream 265347 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 355058 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 400253 13135732 ~ 13184356 (-)

Expression


Co-expression Network