AMCG00008828


Basic Information

Item Value
gene id AMCG00008828
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12891002 ~ 12895612 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008828
agagagagagagagagagagagagagagagagagagcgggagagagagagagagtcaggaGAGTAGAGAGCCAAACAGAGAGGAGGAAAGCACAAGTCTCAGaaggagagaaaagaagaagagagaagaggaaagaagagaagagaacaCCAACAACCAACAACAAAGATACAGACATTAAGACTTTTTccattgaattattattactattaggtTTTTTTAAACTTCTGGAACCAGAGACTGCCACCGCTGCCCTGTGCTCGCTCTCACCATGCCAACTCTCCCACGCCTGCCTGCCCTTCTGCTGACCCTGGCCTGCCTGCGCTGCCTGGCCCTGAGTGCCCGCCTGCCTCCCCCCCGGGGCTGCCCGTCCTGCAGAGAGGCAGGGGCCGCACGGGGGCTTCGGGAGCCGAGTGCGGAGGGGTCCACAGCCACGCTGGGCATCGGGGAGCCCTGTGGCGTGTACACACTGAGCTGCGCCAAGGGGCTGCGCTGCGTGCCCACCCCTGGGGAGAGGAGCCCCCTGCAAGCTCTGCTCCAGGGCCGTGGCATCTGCACCAGGAACCTGGCACCCAGCAAGCCCAAGAATCGCACCACAGGCCCACCAGTTGTTAAGGTCACCACTGGCAACGCGGAGGAAAACgCCCCCTGCCGCCAGCTCCTCAATGCAGTGCTGCTGGGCCTGAAGCCCACCTGCCGCTCTTCCAAGGGCACCCAGAGGGGTGAGTGCTGGTGTGTGGACGAGCTCGGCCAGCTGCTGCCCTCCCCTGACCGGGACCCGGCCACCCTGCGTTGCGAAAGGGAGTGAGGGAGCTTGGCACCCcgtggaggagagagagaaggcgaGAGGTGGAAAGAAAGGGAGgatggagaaggagagaggaggaggaggaggaggaagaccaCAGTGTGTGCTGGACACTGCACGTCCCCATCCCACCCCCCAACCCATCCCAGAGAGATGCAGGCCACAGACtggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008828 True 981 mRNA 0.61 4 12891002 12895612

Neighbor

gene id symbol gene type direction distance location
AMCG00008824 NA coding upstream 50802 12820798 ~ 12840200 (+)
AMCG00008825 NA coding upstream 80574 12803269 ~ 12810428 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding upstream 197501 12688197 ~ 12693501 (+)
AMCG00008813 NA coding upstream 228551 12660779 ~ 12662451 (+)
AMCG00008814 hnrnpa1 coding upstream 231270 12654567 ~ 12659732 (+)
AMCG00008830 pip4k2c,LOC103385206 coding downstream 4283 12899895 ~ 12907881 (+)
AMCG00008829 NA coding downstream 14073 12909685 ~ 12912736 (+)
AMCG00008831 NA coding downstream 63145 12958757 ~ 12962983 (+)
AMCG00008836 NA coding downstream 101486 12997098 ~ 13002084 (+)
AMCG00008838 NA coding downstream 109990 13005602 ~ 13014133 (+)
G51736 NA non-coding upstream 145236 12739197 ~ 12745766 (+)
G51735 NA non-coding upstream 168022 12721082 ~ 12722980 (+)
G51718 NA non-coding upstream 243038 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 331303 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 386826 12503916 ~ 12504176 (+)
G51796 NA non-coding downstream 737 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 32006 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 83252 12978864 ~ 12980775 (+)
G51904 NA non-coding downstream 244951 13140563 ~ 13187139 (+)
G51968 NA non-coding downstream 414004 13309616 ~ 13310773 (+)
G51756 NA other upstream 44769 12842715 ~ 12846233 (+)
G51734 NA other upstream 174216 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 341384 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 1186589 11694654 ~ 11704413 (+)
G51445 NA other upstream 1425514 11460363 ~ 11465488 (+)
G51812 NA other downstream 29626 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 85192 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 326708 13222320 ~ 13224946 (+)
G51939 NA other downstream 358202 13253814 ~ 13257640 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other downstream 410883 13306495 ~ 13309430 (+)

Expression


Co-expression Network