AMCG00008839


Basic Information

Item Value
gene id AMCG00008839
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13030570 ~ 13046587 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008839
ATGGTGGCAATGAAGGCTCTGAAAAATGGAGATATCGTAATCTTTGGTAATTTTGAGAGggaTTTGAAGCCAGATAACTTGGTGCTGGACTCGGTGGGCTATCTTAAAATTGCGGACTTTGGGCTCTGcaagaaagGCCTCGGTTTTGGAGATCACACTAGTTCAGCTTGCGGCACTCCCTCGTATTTTGCTCCAGAAGTCCTGTCGTACACCCGGGCAGTGGATAGGTGGGACCTGGGTGTGCTCATCTTTCATATGCTGGTTGACAAGCCTCCTTTCCGCGGTGACGATGGAGACCAGCAGTTTCGCAACATTGTTGAGGCTGAAGTGCGATATCCTTGGTTCGTCTCCTCGAACGCCACCTCCATAATGAAAGAGGTGCAGCTGCTTGGAGACAACATGGGATTGAAGTCGCTCTTGAGGAAGTGCTACGTGTATCCTGTAGTGCTGGCGCTCATGGTCTGGAGGCAGTTCACGTCTCGCCTGAAAAAGCCCGATGCCGGTCGGAGGCGGAGGAAGGCGCTGGAGTGGTTCTGCCTGAGGCACAGAGCCTCACTGCCGCCTCCAGCACGGCATCTCCCCGGCGAGCAGCACGACGGCCCTGGAAAGACCGAGTCAGAAGATGGACATTGCTCGGCGGCGCAGCAGATGGAGCTCAGTGAACGGAAGCCGAGGCAAGGGATTTTGCCTTCGGTGGATGCTGGGTGGCAGGAGAGTCGGTTCATCAAAGCATCCGTGACTTCAGCGATACATTTTGATGAATTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008839 True 768 mRNA 0.54 8 13030570 13046587

Neighbor

gene id symbol gene type direction distance location
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding downstream 61033 12966348 ~ 12969537 (-)
AMCG00008833 NA coding downstream 88334 12926593 ~ 12942236 (-)
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding downstream 112774 12913536 ~ 12917796 (-)
AMCG00008826 spryd3 coding downstream 145902 12863623 ~ 12884668 (-)
AMCG00008827 NA coding downstream 174345 12847007 ~ 12856225 (-)
AMCG00008846 NA coding upstream 108910 13155497 ~ 13158303 (-)
AMCG00008843 NA coding upstream 127606 13174193 ~ 13180841 (-)
AMCG00008850 NA coding upstream 138852 13185439 ~ 13203264 (-)
AMCG00008848 zc3h10,LOC108412311 coding upstream 160302 13206889 ~ 13208547 (-)
AMCG00008852 LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565 coding upstream 173337 13219924 ~ 13224794 (-)
G51875 NA non-coding downstream 7466 13022024 ~ 13023104 (-)
G51851 NA non-coding downstream 105914 12923204 ~ 12924656 (-)
G51811 NA non-coding downstream 109779 12920545 ~ 12920791 (-)
G51809 NA non-coding downstream 122237 12907321 ~ 12908333 (-)
G51724 NA non-coding downstream 370453 12657226 ~ 12660117 (-)
G51946 NA non-coding upstream 122843 13169430 ~ 13213278 (-)
G51950 NA non-coding upstream 162964 13209551 ~ 13211199 (-)
G51947 NA non-coding upstream 167685 13214272 ~ 13215995 (-)
G51948 NA non-coding upstream 207266 13253853 ~ 13257619 (-)
G51965 NA non-coding upstream 252751 13299338 ~ 13300283 (-)
G51867 NA other downstream 28682 13000826 ~ 13001888 (-)
G51799 NA other downstream 133436 12895335 ~ 12897134 (-)
G51797 NA other downstream 138973 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 425310 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1704211 11235642 ~ 11326359 (-)
AMCG00008845 NA other upstream 43950 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 89145 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 211111 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 260835 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 270280 13316867 ~ 13325227 (-)

Expression


Co-expression Network