AMCG00008845


Basic Information

Item Value
gene id AMCG00008845
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13090537 ~ 13097934 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008845
ATGTCGTCACCAAACAACTGGGACGCTGACAGTGAAGGCCGCGCTGCCAAGCTGCTGCGGAAATCCAGAGACGCCCCCTTCGTCCCGATTGGCATGGCAGGCTTCGTGGGGTTGGTGGGGTTCGGGCTGTGGCGGCTGCGCTCGCGGGGGGCAGTGAAGATGTCAGTGCACCTGATCCACACGAGGGTGATGGCCCAGGGCTTTGTGGTGGGAGCCATGACGCTGGgTGTGATCTACTCCATGTACAAACAATACCTGGTGCCTGAAGACCCCAGCAGACCCAGCAAGTGA
>TU64926
CGGATTGGACGAGACGGCACCGGCACGCAAACAGACCTGCCGGTCACTCTACTGCCCTACACCGGGTTTGTGGCTTTGCATTGCTGTACGGACAAGGATAAGTGCACAACCCAACTCTTCCAGCGGCGATGTCGTCACCAAACAACTGGGACGCTGACAGTGAAGGCCGCGCTGCCAAGCTGCTGCGGAAATCCAGAGACGCCCCCTTCGTCCCGATTGGCATGGCAGGCTTCGTGGGGTTGGTGGGGTTCGGGCTGTGGCGGCTGCGCTCGCGGGGGGCAGTGAAGATGTCAGTGCACCTGATCCACACGAGGGTGATGGCCCAGGGCTTTGTGGTGGGAGCCATGACGCTGGgTGTGATCTACTCCATGTACAAACAATACCTGGTGCCTGAAGACCCCAGCAGACCCAGCAAGTGACTTTCCCAGACTCCCAGATGCCCACCTGAGCACAGCACACCGCTGACCTCGGACCTGATCCCTGCTCTGATGGCCCGGCTGACTCTCAGCCCTGTCACTCCTGCGGTAACCATCGGCCCAGACTGCACCAGTCTCGTCTCCCGCTGCGCCTGTCTGTTTGGCTGGCGCTGTCCACTGCAATCCACTGAGGGAGAAGAACTAGGTTCGCAGACAagtatttatcaatttatttatttttgtgtgtacgACTGAAGAAGAGCCGCTGCAGGAATGTTAGATGGGTTACACataggagagggagacagacgGAGAGCGGCAGAGAGTGTCACACAGTCGATATATCAGTGTATCGGACAGTCAGCATATTAGTGTATCTCTGAATCATATATTTCAAACAACATCTGGCAGCTTTGAAAAACTGCACTGGCTCAAACAGATGTAATCAGGAGGGCGATTACATCTGTTTGAGCCACTGGGCCTGTGTTCACTGCACACCTGTAAACACAGAGGAGCTGACTTCCATCTGTTGTTTCTCTTTAGAGGGAGGGGAAAAGACATGtcagatctctctctccttttatatttcttaaataaaagtattttacggGGATTTCCAGGTTTGgcatcatgttttttctttctgttttacaaaatttaaaaaagctcAGAAGATTGGCACAGCCAGGGCTCGTCGCCACAGTTAGCTTTGGTTGGTCTGGGTTTCAGCTGTTCTGTAATACCGTCCAACTCAATACCACACAGTACAGTCCTGTCCTTTTCAATGTATTACAGCACAAATTTTGGACAAACCACTACTGTAAAGGCTCCGCGAGTCCTGGCCCTTCAGCTGCAGGTGCGGTTTCTCTTATGTCATTCTCttgactttaattaattaaccaagTCAGTTAATTGGCTTAAATGGGTCagaattattaataacattaattaatatggccaaaaaaaacacttcatttataatttgtaaaagagaaaattcaattttattttttaacacattttcaggtCAGGTTGTTGTTAAAAACATACTAAAATCCTTCCAATTCCGATACAGAATTAGGAAAGGAGTCATTTTCTCCCAAGATGCACTGTCAGTTTGGTCAGAGAcctgttttgctgttttgcagTGCTGTATTGAAGGAAAGACCATTATGGAGAGGGGGTGGTTAGTAATGTAGCTCTGAGACCTACACGTATCTGGCTGGTGAACTACCCCCCCTTCCCAGTATAAGAAATTGAATAGCCCACTTTCCCTTGAGGGGAAGGTCAAAGGTTACTGACAATTTATCTTGGGATTGGTAGTACTACTTGTTTTATAAGTGCTAACCAATGCAacactttttaataaattgatttGACACACAATAAAAAGGTGCACAGTGTACAAACATCTGTACCACATTCCCCACGATGCTGGTGTCCGATGGCACTGGTCGATGTTTACTACGTtgggtaaacaaaaaaaatgtttccattgTTAGAAAAACTATCGCTTTTAAAAAAAGCAGTTGACCGTAGCACTGCAGAGTGCTCCGGCTCGTACTGAACTGAGTTACTGCAGCTTTTTGGCCACCTAGCGGCAATTACTCAATTCAAATTACTAacagcatttgtgtgtgtgtctgtgtcagtatAAGCATCAGTCTGTGAttggtgtcagtgtgttgtctgtaatcctgtgtttaaaaaaaaaagtgtaaaaacaaaaaattaataaaattcaaCGTTACAAATAAGGCCCCATGTGCTGTAACTCTTCACAGATAAGCCATCTCTAATAATACACATTGTTACAatctctaataataataataaaatagtaggAATGTTAGATttcagtggggggggggggtcttgtCTTCATTCTTCTTCAGGGTCTAAACTGATTAGACTAGTTATCAGTCAACCCCCACCTGTACTATTTCAGGTCTAAATCGGTCACCCCCCTCCTGCTCTCTGCACCCAGACGGACACTTGGGTGTGGATATGCAAGGCTCTGTAGAACTCTACAGCCACATGTTCAACTGTAATAATACTCATATAATTTAGGGTAGGCCAAAAACACTTGAGAGTGCAGTGGAGTGGTGTCCGCTCACAGGAAGGGGGTGCTCGGGTCACTCCTGGGCCACATGCGTTTCTGATCCCCTCCATCAACAGATCGAGTGAGTTGGCCGATTGTCAATTCAGGCTCTGATGCCCAGCAGGCCCCCTCTCCTTTGCTATCTTTCCCCAGGCGTCGCTTCATCCATCTCGTTCAGGAGGTAGAGGTCAGAGTGAGGCATCAGCCGGAActgagtgggggaaaaagagaatTGGGcaggagggtgagagagagatagggatggagggatgggggtgagaaagagagagagcaagatagtcagatggagaaagagagagggtaAAACGGTTACTCACAGGTCTGACAGGGAGGTCACACATGGACAGCTGG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008845 False 291 mRNA 0.61 3 13093007 13097390
TU64926 True 2889 TUCP 0.46 4 13090537 13097934

Neighbor

gene id symbol gene type direction distance location
AMCG00008839 NA coding downstream 43950 13030570 ~ 13046587 (-)
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding downstream 121000 12966348 ~ 12969537 (-)
AMCG00008833 NA coding downstream 148301 12926593 ~ 12942236 (-)
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding downstream 172741 12913536 ~ 12917796 (-)
AMCG00008826 spryd3 coding downstream 205869 12863623 ~ 12884668 (-)
AMCG00008846 NA coding upstream 57563 13155497 ~ 13158303 (-)
AMCG00008843 NA coding upstream 76259 13174193 ~ 13180841 (-)
AMCG00008850 NA coding upstream 87505 13185439 ~ 13203264 (-)
AMCG00008848 zc3h10,LOC108412311 coding upstream 108955 13206889 ~ 13208547 (-)
AMCG00008852 LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565 coding upstream 121990 13219924 ~ 13224794 (-)
G51875 NA non-coding downstream 67433 13022024 ~ 13023104 (-)
G51851 NA non-coding downstream 165881 12923204 ~ 12924656 (-)
G51811 NA non-coding downstream 169746 12920545 ~ 12920791 (-)
G51809 NA non-coding downstream 182204 12907321 ~ 12908333 (-)
G51724 NA non-coding downstream 430420 12657226 ~ 12660117 (-)
G51946 NA non-coding upstream 71496 13169430 ~ 13213278 (-)
G51950 NA non-coding upstream 111617 13209551 ~ 13211199 (-)
G51947 NA non-coding upstream 116338 13214272 ~ 13215995 (-)
G51948 NA non-coding upstream 155919 13253853 ~ 13257619 (-)
G51965 NA non-coding upstream 201404 13299338 ~ 13300283 (-)
G51867 NA other downstream 88649 13000826 ~ 13001888 (-)
G51799 NA other downstream 193403 12895335 ~ 12897134 (-)
G51797 NA other downstream 198940 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 485277 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1764178 11235642 ~ 11326359 (-)
AMCG00008844 NA other upstream 37798 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 159764 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 209488 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 218933 13316867 ~ 13325227 (-)
G52099 NA other upstream 587401 13685335 ~ 13686737 (-)

Expression


Co-expression Network