AMCG00008852 (LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565)


Basic Information

Item Value
gene id AMCG00008852
gene name LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13219924 ~ 13224794 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008852
ATGTCGGGAGACGACGAGCAGCAAGAGCAGACCATCGCCGAGGACCTGGTGGTCACCAAGTACAAAATGGGGGGCGACATCGCCAACCAGGCTGTGCGCAAGGTGGTGGAGGCGGCCCAGCCCGGCGTGTCAGTGCTGGCTCTGTGTGAAAAGGGGGACTCCCTCATCATGCAGGAAACTGGCAAGATCTtcaagaaggagaaggagatgaagaaAGACTACACCCTGAAGGAGGGCGACCTGATCAAAATtgaCCTGGGAGTGCACGTGGATGGCTTCATCTCCAATGTGGCTCACAGCTTTGTTGTTGGAGCGACCAAGgagGCCCCTGTGACAGGGCGGAAGGCCGATGTCATCAAGGCCGCCCACCTGTGCGCGGAGGCTGCTCTGCGTCTCGTCAAGCCCGGCAACCAGaaCACCCAGGTGACAGAAGCCTGGAATAAGGTTGCCCAGTCCTTCAAATGCACAGCCATTGAGGgtaTGCTGTCTCACCAGTTGAAGCAGCATATTATTGATGGGGAGAAGACCATCATCCAGAATCCCACAGACCAGCAGAGGAAGGACCATGAGAAGGCGGAGTTTGAGGTGCATGAGGTTTACGCTGTGGACGTCTTGGTCAGCACTGGGGAGGGCAAGgcGAGAGACGCAGGTCAGAGGACCACCATTTACAAGCGAGACCCCACCAAGCAGTACGGGCTGAAGATGAAGACTTCGCGGGTTTTCTTCAGCGAGGTGGAGAGACGCTTTGACGCCATGCCCTTCACCCTCAGAGCGTTTGAAGACGAGGGGAAGGCGCGACTGGGTGTGGTGGAGTGTGCCAAACACGAACTGTTGCAGCCTTTCAACGTGCTCTACGAGAAGGAAGGTGAGTATGTGGCCCAGTTCAAGTTCACAGTGCTGCTGATGCCCAACGGACCCATGCGGATCACCAGCGGCCCGTTCGAACCAGAGCAGTACAAGTCTGAGCACGAAGTACAGGACCCCGAGCTCAAGGCCCTGTTACAGAGCTCAGCCAGCAGGAAgacacagaagaagaagaaaaagaag

Function

NR:

description
PREDICTED: proliferation-associated protein 2G4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008852 True 1047 mRNA 0.57 12 13219924 13224794

Neighbor

gene id symbol gene type direction distance location
AMCG00008848 zc3h10,LOC108412311 coding downstream 11377 13206889 ~ 13208547 (-)
AMCG00008850 NA coding downstream 16660 13185439 ~ 13203264 (-)
AMCG00008843 NA coding downstream 39083 13174193 ~ 13180841 (-)
AMCG00008846 NA coding downstream 61621 13155497 ~ 13158303 (-)
AMCG00008839 NA coding downstream 173337 13030570 ~ 13046587 (-)
AMCG00008851 NA coding upstream 2827 13227621 ~ 13246570 (-)
AMCG00008849 NA coding upstream 43740 13268534 ~ 13273981 (-)
AMCG00008861 NA coding upstream 77918 13302712 ~ 13305069 (-)
AMCG00008859 NA coding upstream 104175 13328969 ~ 13331002 (-)
AMCG00008864 acvr1ba,LOC108275853,LOC107716207,LOC107695803,LOC107708859,LOC107563637,LOC107570552 coding upstream 215128 13439922 ~ 13456129 (-)
G51947 NA non-coding downstream 3929 13214272 ~ 13215995 (-)
G51946 NA non-coding downstream 6646 13169430 ~ 13213278 (-)
G51950 NA non-coding downstream 8725 13209551 ~ 13211199 (-)
G51875 NA non-coding downstream 196820 13022024 ~ 13023104 (-)
G51851 NA non-coding downstream 295268 12923204 ~ 12924656 (-)
G51948 NA non-coding upstream 29059 13253853 ~ 13257619 (-)
G51965 NA non-coding upstream 74544 13299338 ~ 13300283 (-)
G52019 NA non-coding upstream 148589 13373383 ~ 13455852 (-)
G52041 NA non-coding upstream 213294 13438088 ~ 13439626 (-)
G52131 NA non-coding upstream 546766 13771560 ~ 13776929 (-)
AMCG00008844 NA other downstream 35568 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 121990 13090537 ~ 13097934 (-)
G51867 NA other downstream 218036 13000826 ~ 13001888 (-)
G51799 NA other downstream 322790 12895335 ~ 12897134 (-)
G51797 NA other downstream 328327 12890811 ~ 12891597 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 32904 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 82628 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 92073 13316867 ~ 13325227 (-)
G52099 NA other upstream 460541 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 713657 13938451 ~ 13983893 (-)

Expression


Co-expression Network