AMCG00008859


Basic Information

Item Value
gene id AMCG00008859
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13328969 ~ 13331002 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008859
ATTGCAGGATATGATTGGTCAATCGGAAAATGACAGAATCCTCCTAAACTGCATTCAACTGTTGCCTCATAGCTCCTTAGCTGATATCGCCCCCTATGGGTAAGGGGCTAGTGATGACCTATGTGCTCTGGGCAGCGGGGGGGCTGCTCGGACTGCACCACCTATACCTGGGGAGAGACAGCCATGCCCTGCTCTGGCTGCTCACCTTTGGGGGGTTTGGAGTGGGCTGGGCCAGGGAGTTCTACCGCATCCCCGCCTACGTGGAAGCAGCCAATCGGGAAGAAGATGGAGGAGCCAGGAGTGGAAGGAATCACAGGGCCATGCCTCCCCCGATGAGTCCCTTCCGACTGGCCGGCCAGGTGTGCGTTGGTGTGTACTTTGGGGTGGTGGCCCTGATTGGCCTGCGCTCACTGAGCTGTTTCTGGCTCCTGGTCCTGCCACTGAGTGTGTGCGCGGGGGTGCACCTAGTGTCCTGTGCTGGGCcgctgacctctgacctgcaTAGCACCCTGTTTGCCGGGCTGCTGGCCTCGCCCGTGTTCTACGGCAATGCCCTTGCCCCACTGCCCATCAGCCTCGCCGCCAGCATCACCGCCAGCCAACACCGACACTACAAACCCACAGCCCCACCTGGAGCCCCCCCGGATAAGCTGGGTGCCCGTCTCTACCGCCTTGGTCTGTGCTGGCTGGCATTCTCGGCCCCGCTGGGATACTGTGCTTTCTACAACACGACTGCCACCCTCTCCTATATCTCTGACTGTGTCGCCGCCCTGCTGGACTGGCTGTGGTTTTTCCCCTGGCTGGGCCGGCTGCTGGAGTCCTGCCTGCTGCTTCCCTACAGGGTCCTATGCCTTGTGACTGGGGGGCGAACACCTGAGCAGGGCTGGGAGGGGCTGCTGGACTGGCTGATCCGAGAgtacagcgagagagagaggcatgCACTGAAGGTGCTGTCACTGAGCAGCAGTGCAACCCCGGAAGAAATCACTCACAGCTACCGCGAGCTGGTAAAGCAGTGGCACCCGGACCACAACCCTGGTCGGAGCCAGGAGGCAGCCCAGATGTTCCTGCAGATCCAGGAGGCCTATGAGACACTGCAGAGCCGGCGCCGGGCACACAGGGCGGCCTGACCCAGCTGTTTCCTCCCCCACATCCCCTGTAACCGTTGCCCCTTCTCCTGGACTTTCTCCCCCTGTATCTCTCCCACGCATTAAAGCAATTCTACTTGCAGCAAAAATGTCCAAAGCCTAACACTTTAGATTCTAGAACcctggggaggtgggggggaggtaGCTAGGGGTTTAAACAACAGTGGTACCACAGATAGGCATAACACGGCAGCAACATGCCAAACAAGAGGTGGGCCTAAAACTTACAGCAACAAGAGCACAAAACATAGATGGGTTAAATATCAGTTCTAGCCCAGCAGTGCACCAACTACACACTTAATGACATACACTCGTGGCACATACATTAAAGCACACACTACATGGACTGTGCTCCTTTTGTGAATTCCTGGTGTTTTCTGCCATCTTGTGGTGGGCTGTATAATGCAGGTAAAAAAATACCATCCTTCCAAATACCACTGCTGAGGTAATAATTTAGTGTTCAGTTTTTAAACTTCAGGCATCTACTACCTGCTTTGTTGGGTACTCCCAGTGTGAATCCCTCCCGTGTCCTCCCAGCTTGTGGTCACTGCAGGGTGATGGGGGGGAGTCATTCCCAAAGCCTTGGCTGTTACAGTGTTCACCAGATGGTTcagaataaaaactgaaatgaactgAAA

Function

GO: NA

KEGG:

id description
K19370 DNAJC22; DnaJ homolog subfamily C member 22

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008859 True 1786 mRNA 0.56 3 13328969 13331002

Neighbor

gene id symbol gene type direction distance location
AMCG00008861 NA coding downstream 23900 13302712 ~ 13305069 (-)
AMCG00008849 NA coding downstream 54988 13268534 ~ 13273981 (-)
AMCG00008851 NA coding downstream 82399 13227621 ~ 13246570 (-)
AMCG00008852 LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565 coding downstream 104175 13219924 ~ 13224794 (-)
AMCG00008848 zc3h10,LOC108412311 coding downstream 120422 13206889 ~ 13208547 (-)
AMCG00008864 acvr1ba,LOC108275853,LOC107716207,LOC107695803,LOC107708859,LOC107563637,LOC107570552 coding upstream 108920 13439922 ~ 13456129 (-)
AMCG00008865 NA coding upstream 128559 13459561 ~ 13473216 (-)
AMCG00008866 NA coding upstream 149976 13480978 ~ 13487619 (-)
AMCG00008869 NA coding upstream 206991 13537993 ~ 13540286 (-)
AMCG00008874 NA coding upstream 249414 13580416 ~ 13584831 (-)
G51965 NA non-coding downstream 28686 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 71350 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 112974 13214272 ~ 13215995 (-)
G51946 NA non-coding downstream 115691 13169430 ~ 13213278 (-)
G52019 NA non-coding upstream 42381 13373383 ~ 13455852 (-)
G52041 NA non-coding upstream 107086 13438088 ~ 13439626 (-)
G52131 NA non-coding upstream 440558 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 492111 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 674725 14005727 ~ 14006439 (-)
AMCG00008860 NA other downstream 3742 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 19544 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 67147 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 144613 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 231035 13090537 ~ 13097934 (-)
G52099 NA other upstream 354333 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 607449 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1362828 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1509705 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1701345 15032347 ~ 15057206 (-)

Expression


Co-expression Network