AMCG00008861


Basic Information

Item Value
gene id AMCG00008861
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13302712 ~ 13305069 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008861
GACAAGCTGCAGAAGGAGGAGCGCAGCGCAGCGGTGAATGGGGCAAAGTTGGTGTGTCAGTGGCGGGCGGTGCTTCGGGCGGCGCGGACAGAGGAGCTGCGCAGGGACGTGGACGTTCTCAGCCAGACCTTCGAGAGGGTGCTGGACCGCAAGGACAGCGTCATCAAGTGTGTGGACCggctgctggagctgcagagGGGGCGGCTGCGGGCGCTGGAGCAGCACTGGTGCACCGAGCTGGAGGTGAACCACAGCGAGCAGGACAGCGAGGCGCACCAGGAATACCAGAGCACCCGCGATGAGATCAAGAACAAGAACATTGAAGAGAAGCACGGTCTGAGGCTCCAGCTGGAGGGCGCTGTGGAGCACCTGTGGGGGCAGTTCCAGCAGGCGCTGCACACGTACAACGAGGCCACTGAGGACCGGCGGCTGGCCTTTGAGACGCTGCGTGACCGTGACCAGCGCAGCTCCTACGAGATCGACACGCAGATGAAGAAGCTTCAGAGGATGCAGgacACCATCTCGGCCCTGCGCACACGGATGCTGTCCAGCCAGCGAGAGACCGAGGCGGAGGGGCGGGAGCTGCGGGCGGCGAGGGAAGTGGTGCAGGCACAGGTGCGGCAGGCCAAGGCAGAGCTGAGCCGTGCCCGCACCCGGGAGAGGAGCCGCCTCTCCGCCCTCACCATGCACAGCGCCGCCGCAGTGAAGAGCCTGCAGCAAGTCATACACAGGGGGGAGAGAGTGTTGAAGCTATCCGAGATGTGCCGGCGGCTGGAGACTGAGCAGGAGAAGGTATTGCCCTTCTACCCGTCCTCCCTGAGCGCCGAGGAGCAGAGCCAGGCAGAGCAGGCCGCCCTGGAGCCCCCCTCTGACCAGCTAGCCCAGCTGATGCAGGATTACTCAGTCCTGTCCCGGTTCTGGCAGCGTTATAACAAAGTTCTGCTGGACCGCCTAGTTCTGGAGCAGGAGCGGGCGGCGCTGGCGAGGGAGGGGGCGCAGCTGCGGGCGCTGCTGAAGCAGTACCTGGACGGCATCTCCGTGAGCGACGCTGTCCTGCGCCAACGTAACCCCCTCCTCATCGTCACCAGCCACACCGTCGCCACTGCCCAGCCAACCGGTGCCAAAGCTGGAGCTGCCGCCCCGCCCGTCTCGGACCCCCGCCTTGCCCGCCCCACCCACACCGTCATCGAGGCCGCGCACATTGTACAGCACACCCTATAG

Function

GO: NA

KEGG:

id description
K23728 CCDC65, DRC2; dynein regulatory complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008861 True 1221 mRNA 0.66 7 13302712 13305069

Neighbor

gene id symbol gene type direction distance location
AMCG00008849 NA coding downstream 28731 13268534 ~ 13273981 (-)
AMCG00008851 NA coding downstream 56142 13227621 ~ 13246570 (-)
AMCG00008852 LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565 coding downstream 77918 13219924 ~ 13224794 (-)
AMCG00008848 zc3h10,LOC108412311 coding downstream 94165 13206889 ~ 13208547 (-)
AMCG00008850 NA coding downstream 99448 13185439 ~ 13203264 (-)
AMCG00008859 NA coding upstream 23900 13328969 ~ 13331002 (-)
AMCG00008864 acvr1ba,LOC108275853,LOC107716207,LOC107695803,LOC107708859,LOC107563637,LOC107570552 coding upstream 134853 13439922 ~ 13456129 (-)
AMCG00008865 NA coding upstream 154492 13459561 ~ 13473216 (-)
AMCG00008866 NA coding upstream 175909 13480978 ~ 13487619 (-)
AMCG00008869 NA coding upstream 232924 13537993 ~ 13540286 (-)
G51965 NA non-coding downstream 2429 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 45093 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 86717 13214272 ~ 13215995 (-)
G51946 NA non-coding downstream 89434 13169430 ~ 13213278 (-)
G51950 NA non-coding downstream 91513 13209551 ~ 13211199 (-)
G52019 NA non-coding upstream 68314 13373383 ~ 13455852 (-)
G52041 NA non-coding upstream 133019 13438088 ~ 13439626 (-)
G52131 NA non-coding upstream 466491 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 518044 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 700658 14005727 ~ 14006439 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 40890 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 118356 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 204778 13090537 ~ 13097934 (-)
G51867 NA other downstream 300824 13000826 ~ 13001888 (-)
G51799 NA other downstream 405578 12895335 ~ 12897134 (-)
G51974 rps26 other upstream 2353 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 11798 13316867 ~ 13325227 (-)
G52099 NA other upstream 380266 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 633382 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1388761 14693830 ~ 14715322 (-)

Expression


Co-expression Network