AMCG00008863 (prkag1)


Basic Information

Item Value
gene id AMCG00008863
gene name prkag1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13434457 ~ 13439625 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008863
ATGCTAGATCTGACGGACGCTCTTCCTGCGACGTCACTGGTCTCGCCGGAAACGGAACACCGAGAAGGGGGTGGCAACCAAGCAGTAAACCAAGACCCAAGCGGGGATTGCATTCAGAAAGCAGGAATAAAGGAAATCAGGAAAGCGGCGATAAACCGAGACCATCGAGCGGACTCTCCTAGCTGCAGGCAGCGAGCGGCGGATGGGATGGAGGGTGTCACGGCTGGACTCGAAGACTCAGAGGGCAGAATTGACCCCTCTGTGGATGACCCAGATCGTGATGTCTACGCTTGTTTCATGAAGTCTCACCGCTGTTATGACCTGGTGCCTACCAGCTCCAAACTGGTCGTCTTTGACACATCTTTGCAGgtGAAAAAGGCTTTTTTCGCTCTGGTGTCCAATGGCGTCCGAGCAGCCCCGCTCTGGGACAACAAGAAGCAATGCTTTGTGGGCATGCTGACCATTACAGACTTCATCAACATTCTCCATCGATACTACAAGTCCCCTCTGGTGCAGATATACGAGCTGGAGGAGCACAAGATCGAGACCTGGAGGGaggtgtACCTGCAGGGCTCCTTCAAGCCCCTCGTCAGCATCTCCCCCAATGCCAGcCTGTACGATGCCGTCTCCTCTCTGGTGAAGCATAAGATCCACCGCCTGCCGGTGATCGACCCGCTGACTGGCAACACACTCTACATCCTCACCCACAAGAGGATCCTCAAGTTCCTCAAGCTGTTTaTCTCAGAGATGGCGAGGCCCAAGTTCCTGCAGCGCACCCTCGAGGAGCTCTCAGTCGGGACGTTCGAGCACATCGCCGTGGTGCACCCGGCCACGCCCCTCTACACCGCGCTGGGCATCTTTGTGGAGCAGCGGGTCTCCGCCCTGCCCGTGGTCGACGACAAGGGGCGAGTCGTGGACATTTACTCCAAGTTTGATGTGATAAACCTGGCTGCAGAGAAGACGTACAACAACCTGGACGTGACGGCGCTGGTGCTCACAGTGGGAGgGACAAAAGATGACTGATGGCGGAGGGAcacaggagggagggagtgggagaCCGGGGTGCCAGGAATGACAATAGCAGGAGGGGTAGAGGTTAGACAGGCATTCGTCAAAGTCCCCCTTCACTTTGTCCCTGccctcccaacacacacacagcccccccaaCACTCCCTatctcaacccccccccccccggggaAGGTGGAAACCCACCACTCTGTGGGCTGCAAATACCACCCTCAAGGACTGTGACATTCAGAGCTGAGCCGGTCCGGTCCAGACCAAATCAATTCAGCATTTCATTTGGATTGATTGTTTGGGGGGGTAATCATGTGATTCCCTCTTTCGCTTTCACTCTTCATTTGTGCTATCCTGTCTGCTCGGTCAGGGGGCCTAGGACCTGGACTCTGTGCACTTCAGACAGCTGAACCGGCAGCACATCCCGCTGGGCACAAACCGACACTGCCCTCTGTGTCTGGCCTTATGGACCTATATGAACATAGATACTTAAGATGTTTTTCACAGATTGTAGCAATAGTCTTGAAAGAGGTAAAGTTGCACCCAGATTTACTTACCAAGATAATtataaatttatatattatatataatatctcaTTAGTTCTCTTGTCCTACTCCATTCCTTACTCTTAGATCATTATTTTTACTACCACTTTATCCTAATTTAAGTTCTATATCAGGTCTTTATGAGCctggttggtgtgtgtgtgtcttttgtacGTCTCTGCGTgccagtttgtgtgtgtgtgttcatgttgGGGACAGACAAATgcaagcaaacaagaaaaaacaagaaaagggaTCTTAATATTTTGGCCCAATACCTCCCAGCTGCTCTCAGCTCCTCTTTGGGCCCAGCAGCCAATTTGGAGCATCTGCTTCTCTTTCCCGCTGTCCTTGTTTCTGTACATCTTTCAGCCATACTGCACTTCCTTATTACGGcataatatgaattaaaataatcaaaaataaagtcCTTGTGTGGGGCTGGTCTCGTGAGGGCCTGGCTGCCCACTCACCCTGGGTTAATGTCCAGTGCAGGGTGCTTCACTGAGACCTAAACTATGACCCTGCAGACCGAGACGAGTGGGtgggtattttgttttaatttgatatgtGAAGCTGCCTCAAAGCAGGGAAGTGATGTGGTCACTTCACACAGTTATCAATTATAAATgctgttttactttaattagaCTTGATTTTTGAAGACATACaggtatatattatatacagttttgtttcttttctattCATGCTGTACATGTCATTTTTATCTTGAGCATGAGcaataaactgtatttatttta

Function

symbol description
prkag1 Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within phosphorylation and regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PRKAG1 (protein kinase AMP-activated non-catalytic subunit gamma 1).

NR:

description
PREDICTED: 5'-AMP-activated protein kinase subunit gamma-1

GO:

id name namespace
GO:0030554 adenyl nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008863 True 2329 mRNA 0.50 14 13434457 13439625

Neighbor

gene id symbol gene type direction distance location
AMCG00008862 kmt2d,LOC107563643 coding upstream 3216 13387407 ~ 13431241 (+)
AMCG00008854 rhebl1,LOC105901881,LOC103035598,LOC108435697 coding upstream 56755 13368598 ~ 13377702 (+)
AMCG00008855 NA coding upstream 68352 13355405 ~ 13366105 (+)
AMCG00008857 LOC102783756 coding upstream 87095 13333765 ~ 13347362 (+)
AMCG00008858 NA coding upstream 131829 13299306 ~ 13302628 (+)
AMCG00008867 NA coding downstream 78038 13517663 ~ 13534601 (+)
AMCG00008868 LOC106567041,LOC103368469,LOC105013543,LOC100705688 coding downstream 132901 13572526 ~ 13582004 (+)
AMCG00008871 NA coding downstream 177426 13617051 ~ 13628477 (+)
AMCG00008870 NA coding downstream 189548 13629173 ~ 13638246 (+)
AMCG00008875 NA coding downstream 244943 13684568 ~ 13685905 (+)
G51970 NA non-coding upstream 119405 13313590 ~ 13315052 (+)
G51969 NA non-coding upstream 121999 13311329 ~ 13312458 (+)
G51968 NA non-coding upstream 123684 13309616 ~ 13310773 (+)
G51904 NA non-coding upstream 247318 13140563 ~ 13187139 (+)
G51828 NA non-coding upstream 453682 12978864 ~ 12980775 (+)
G52044 NA non-coding downstream 37125 13476750 ~ 13476978 (+)
G52100 NA non-coding downstream 247214 13686839 ~ 13687780 (+)
G52234 NA non-coding downstream 688862 14128487 ~ 14128691 (+)
G52361 NA non-coding downstream 1103014 14542639 ~ 14545754 (+)
G52364 NA non-coding downstream 1113271 14552896 ~ 14553241 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 125027 13306495 ~ 13309430 (+)
G51939 NA other upstream 176817 13253814 ~ 13257640 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other upstream 209511 13222320 ~ 13224946 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 441732 12980804 ~ 12992725 (+)
G51812 NA other upstream 507663 12925238 ~ 12926794 (+)
G52349 NA other downstream 1042296 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 1088193 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 1298824 14738449 ~ 14754644 (+)
AMCG00008920 NA other downstream 1343418 14783043 ~ 14795184 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other downstream 1367672 14807297 ~ 14811757 (+)

Expression


Co-expression Network