AMCG00008866


Basic Information

Item Value
gene id AMCG00008866
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13480978 ~ 13487619 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008866
ATGTCAGGAGGGATACGCACTTACGGGCTGCTGGAGAGGAACAATGCACTGGCAGAGAAACTgggctctttctctctctctcttaACGACCCCGATCTGGACCCGGGGGGGGGCCTGGACGATGAGTCAGCCTCAGAGGTGTCTGCTGCCAGCAACGATGTCTCCGACGACTCAGACACGGTCAGCGTGCTCTCGGACGACTCGGTATACCCTGACTATGAGGCAGAGGGCAGACCGGAGGTGGAGGGGCCCGAATTCACGCTGTACCAAGCCTGTGCCAAGAATGACGCGGCAGCCCTGGGTCGTGTGCTGCAGAGAGGGGTTGAGCCCGAGGAGGTCATGGAGATCGACATCAATGGCAGGAACGGACTGATGCTGGCATGCTACAAGGGCTTTGTGGACATCGTGTCCATCCTGGACCAATGTCCACACCTGGACGTCAATCACAAGGACAATGATGGCAACACAGCCCTGATGATCGCCTCACAGGCAGGTCACATCACCATCGTCAACTACCTCCTCAACTACTTCCCTGGCGTGGAGATGGAGGCCAGGGACACACGGGGCTTCACAGCACTCATCAAGGCAGCCATGCAGGGGCGCAATGAATGTGTGGCTGCTCTTATGATGGCCGgCGCGGAGGTGAATGCGGTGGACCTGACCCGGGGGAAGACGGCACGGGAGTGGGCTTTGCAGACGGGCCGTTCCGAGACACTGATCCAGATCCGCCGTCTCCTAGCCAAGCCACGGGCCGACCAGTTCTGCCAGGCCTATGTGCCTGAGTGGCCGGAGCTCAAGGACCTGGTGGCCAAGGCGATGGTCGCCAAGAGCCGCGGTGAGAAGTTGAGTCAGCGCCTGCGCAGCACCTTCACCTTCAACTTCCCCCGCGACCCGGAGGATGGCGGGGTGCTGGACCACATGGTGCGAATGACCACTGCCATCTCCGGCCCCTTCGTGGGCACCGCCTGCCGCCCCCTTTGTCCCACCAGCCCCCCGGAAGTGGGCAAGCGGCGGCTGGCAGTGCCCGACATCGTGAGCCAGTACCCGGGAAGGCAGGCGGAGGAGACATCGGTCAGACACAGCAACggctccatctcctcctcctcttcctcgtcctcctcctgctccacaccctcctcctcctctgagaCACGCAGGGGCAGCATGCTCTCACTGGCGTCCTCAGGGGTGCGCAGCTTCCTGCCCAGCCGCATGAGCCACAGGAACAGCGTGTTCCCGGCTGGCTGCATCCCACAGATCAAGGTGACCAAGTCCGGCGAGCCGACGCCCAAGAAGGAGAAGAAGCACAAGTCCAAGGGTGGCCACTACCTGGAGCCACCCAAGTGGAAGTACAAGGAgctgaaggaggagaagaagaaggcagagaaggagaaggaggagaaggagaaagaggacAAGAAGTGCAAATCTAAGGACaaggacaagaagaagaagaagaagaagtgaGAAAGGGGTTGTCCTACTTCCTCCTGcacatccccccaccccacatacacacacactcactcaaacacacaatcatggacacacagacacagacagaccaacacacactctcacatacacacaaactcactcccacacactctaacacactcactcatgCACTCACTCCCACTCatgcacactcactcacactcactaaCACTCCATGGCCCGTTCACTGTGGAATTGAATTGTTTTCTGTGGGTTTGGTGTTTGTATTGGGATCGTTTCCTGCGCTGCTCGAGGTGGTGTGGGGTCATGTTGTTCTGTTATCAGAAGGATGCTCTCCGTTCGGACTGGGATCTGATTGCGTGTAGGGAGAAGGCTGGGGACGTGGAGCCAAACAAACCTGTCtgtgtgatgtatttatttgttttctttctacatGGATGTTTTccgttcagaaaaaaaaaaatgttattgtgtcAGCCATTTacgtatttatttgtttataaacttGCACTTGATTCTTGCAGATGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008866 True 1988 mRNA 0.57 5 13480978 13487619

Neighbor

gene id symbol gene type direction distance location
AMCG00008865 NA coding downstream 7762 13459561 ~ 13473216 (-)
AMCG00008864 acvr1ba,LOC108275853,LOC107716207,LOC107695803,LOC107708859,LOC107563637,LOC107570552 coding downstream 24849 13439922 ~ 13456129 (-)
AMCG00008859 NA coding downstream 149976 13328969 ~ 13331002 (-)
AMCG00008861 NA coding downstream 175909 13302712 ~ 13305069 (-)
AMCG00008849 NA coding downstream 206997 13268534 ~ 13273981 (-)
AMCG00008869 NA coding upstream 50374 13537993 ~ 13540286 (-)
AMCG00008874 NA coding upstream 92797 13580416 ~ 13584831 (-)
AMCG00008873 NA coding upstream 97468 13585087 ~ 13608948 (-)
AMCG00008872 NA coding upstream 151038 13638657 ~ 13643375 (-)
AMCG00008878 NA coding upstream 233091 13720710 ~ 13734038 (-)
G52019 NA non-coding downstream 25126 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 41352 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 180695 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 223359 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 264983 13214272 ~ 13215995 (-)
G52131 NA non-coding upstream 283941 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 335494 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 518108 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 639620 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 784355 14271974 ~ 14275087 (-)
AMCG00008860 NA other downstream 155751 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 171553 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 219156 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 296622 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 383044 13090537 ~ 13097934 (-)
G52099 NA other upstream 197716 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 450832 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1206211 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1353088 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1544728 15032347 ~ 15057206 (-)

Expression


Co-expression Network