AMCG00008868 (LOC106567041,LOC103368469,LOC105013543,LOC100705688)


Basic Information

Item Value
gene id AMCG00008868
gene name LOC106567041,LOC103368469,LOC105013543,LOC100705688
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13572526 ~ 13582004 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008868
AACGCCATGAGCGCCTCGGTGGTCGTCTACCGGAGCCTCTTCACCGAGGACCGGTTCCGCCAGTCGTTCGGCGCCGAGGAGCAGCGCCCCCCGCCGCCCCCGCTGCGCGAGAGGGTCGCCCGGCGCGTGAGGTGCTCGCGAGCCGCGTGCCAGCGGCTGCTGCAGGAGCGGGTGCCCATCTGCGGCTGGTTGCCAAGGTACCGGCTGAAGAAATGGATTTTGGGAGATATGGTGGCTGGCATGACCGTTGGCATTTTGCACATACCACAAGGAATGGCCTTCGCTCTGCTGACGTCTGTGGCTCCCATCTACGGCCTGTACACCTCCTTCTTCCCAGTAATCCTGTACATGATCTTTGGCACCGGGAGGCACGTCTCCACAGGTACCTTTGCTGTCGTGAGCCTGATGACTGGCTCGGTGGTGGagcagctggttcccaggcctgTGGACTTGAACAGCACCAGCCCGGAGGCGGCTGAGATCGAGGCCAGGAGGATCGGCGTGGCGTCTGCTGTGGCCCTACTCTCCGGGCTCATGATGGTGTGCATGTTCATGCTGCAGCTGGGCTTCCTGTCCACCTACCTGTCGGAGCCCATCGTCAAGGCCTTCACCAGCGCCGCCGCCTTCCATGTCACTGTCTCGCAGCTGCAGAGCATGCTGGGACTGCGGCTACCTCGCCACACTGGGCCCTTCTCTCTGTTCAAGACTCTGGCGTCGGTGTTTGAGGGGCTGCCAATGACCAACCTGGCTGAGCTGTTGATCTCCCTGGTGTGTCTGTCCCTCCTGGTCCCCGTGAAGGAGATCAACACTCGCTTCCGCCACCGGCTGCGGACGCCCATCCCCGCAGAGATTCTCACTGTGATCATTGCCACCGGAGTGGCCTACGCCGCCTCCCTGGACTCCAGATATGGGATTCAGATCGTGGGGCACATCCCTGCAGGGTTCCCTCGCCCACAGGTGCCCGCTCTGGACTCTTTGCCCGACGTAGCCGGAGACACCGTGGCCATCACCTTCGTGGGCTACGCCGTGTCCGTCTCACTGGCCATGATCTACGCGGACAAGCACGGCTACTCCATCCGTCCCAATCAGCTGTCATCTCccctgcaggagctgctggctCATGGTATCTCCAACACTGTGTCCTCCTTCTTCACCTGCTTCCCCAGCTCAGCCACCCTGGCCACTACAAACATCCTGGAGAGCGCGGGGGGGTACACACAGCTGTCCGGGCTGTTCACCAGTGTCGTGGTCCTGATTGTGTTGCTGTTGATCGGGCCCCTCTTCTACTTTTTACCCAAGGCAGTGCTAGCCTGTATAAATGTCACTAGTTTACGCCAGATGTTCCTGCAGTTCCAGGACCTGCCGGACCTCTGGAGGGTCAGCAAGATTGACTTTGTGGTGTGGCTGGTCACCTGGCTGTCTGTGGTCATTCTCAATGTGGACCTGGGACTGGCCATCGGGGTGGTCTTCTCCATGATGACGGTCATCTGTCGCACGCAAAGGGCTGCCTGTTCTGTTCTGGGTCGGGCCTCCAACACTGAGATATACAGGCCGATGGAGAATCACAGTAAGTGCTATGAAGTCCCGGGAGTGAAGATCGTGTGCTACAACGGGCCGATTTACTACGGGAACCGCAGCTTCTTCCGGGAGGCGATGGGCCGGCTGCTGGGCCTGACGCCCGAGCGGATCCGCCGCAGAGAGAAGGCCAGGAAAGCccaggaaaaaagagagaaaaacaccaTTGCCACCGTGGAGCAGGGAGTGGCGAACACGTCTTTCTCCTCGGAAAACGAACTCTTCAAATCAGAAGCTGCCGAAGGCGAGGTCCAAGCTGTACTAATCGACTGCAGCAGAGTCATCTTTGTGGATGTGGCCGGTGCCCGACTTTTCATCCAGGCAAGTTCAGAGGCATCCCAGGCCACTCCACCCTCAATGTGCTTAGAGTGCCAGAAGTCAGGCTTCCGGATCTATCTGGCCACTTGCAATGAGAGTGTGCTGAAGATCCTGACATCCAGTGGCCTGATGAGCTACATGAGCCCCCAGCACATCTTTGTGACCGTCCACGACGCCGTGCTCCACATCCAGCAGCAGAAGGAGAAATCCCCCGAGAAGACTACCACTGTCTGGGTTTGAGGCTGGGCGGACATTTCCATTCTGGGCCTGCAGGCTCCTCCCTATGCCGTTTTGAATCCAGGAGTGACGCCATCAGTGGGAACAATGAGATCAAAAGCGAGAAAGGAAAAGGgatttaaaactgaaaccaagATGTCCGCCACTTCCTCCTaacgtgtgtgcgtgtgagtgagagtgtttATGTAGCCATGTTTGTGCgggtgtgtatttatgtgtggctgtgtgtgtgtgtgtgtgtgtgtgcgagtctGTTCCAGAGAGGTAGCAAGCCCTCTATGCCCAGCGTGCAGCGGCCATCATTCAGGGTGGCAGAGATCTTGGATAAGCAATACGGGCATACCGTATTGTCCTCCTACGTTTGTAGAAGataaagaaggaaaatgtttgtgttgagCACTCAAACCAAAGGCTGCAGCTCTCGCCTTATTATAGGAATGGCAGCTACCTGCTTGCGAACTGTCACGCTGTTggcaaaacaaaagggaaaagcTCATGAACACTGTCTGATTGGCAGAAACCACACCAAACCACATGTACACAGGAACACAGGCAAATGGGGAAGTCAGTGAAAGCTGTGAAGTTGGAATTATGATTATACCATTTACTGGATTTCAGATTTGATTATATAATCTCAGAATCCAGTATGGCAACCTACAGATCAAGTATCAATGAATTATTTGCAATAGCAGTGAGCTCTAATTggttttaaacttattttatattgcagaTTTGACAGCAGAAATGTTGGAAGTCTAGggaaacaatgtaatttttattgtatttttatgctGCATTTGAATAATGATGCTGTCTGACTAAACTTGTACAGCCCatcacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctacatgGCTACATGTATGTCATTgacttgtactgtatttaacatGGAAATATTTTTCAACATACTTTTGCAATAAACCTGCATTTCCTGTAA

Function

NR:

description
PREDICTED: solute carrier family 26 member 10-like

GO: NA

KEGG:

id description
K14453 K14453; solute carrier family 26, other

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008868 True 3099 mRNA 0.54 18 13572526 13582004

Neighbor

gene id symbol gene type direction distance location
AMCG00008867 NA coding upstream 37925 13517663 ~ 13534601 (+)
AMCG00008863 prkag1 coding upstream 132901 13434457 ~ 13439625 (+)
AMCG00008862 kmt2d,LOC107563643 coding upstream 141285 13387407 ~ 13431241 (+)
AMCG00008854 rhebl1,LOC105901881,LOC103035598,LOC108435697 coding upstream 194824 13368598 ~ 13377702 (+)
AMCG00008855 NA coding upstream 206421 13355405 ~ 13366105 (+)
AMCG00008871 NA coding downstream 35047 13617051 ~ 13628477 (+)
AMCG00008870 NA coding downstream 47169 13629173 ~ 13638246 (+)
AMCG00008875 NA coding downstream 102564 13684568 ~ 13685905 (+)
AMCG00008877 NA coding downstream 106763 13688767 ~ 13720249 (+)
AMCG00008876 NA coding downstream 152970 13734974 ~ 13738084 (+)
G52044 NA non-coding upstream 95548 13476750 ~ 13476978 (+)
G51970 NA non-coding upstream 257474 13313590 ~ 13315052 (+)
G51969 NA non-coding upstream 260068 13311329 ~ 13312458 (+)
G51968 NA non-coding upstream 261753 13309616 ~ 13310773 (+)
G51904 NA non-coding upstream 385387 13140563 ~ 13187139 (+)
G52100 NA non-coding downstream 104835 13686839 ~ 13687780 (+)
G52234 NA non-coding downstream 546483 14128487 ~ 14128691 (+)
G52361 NA non-coding downstream 960635 14542639 ~ 14545754 (+)
G52364 NA non-coding downstream 970892 14552896 ~ 14553241 (+)
G52372 NA non-coding downstream 978715 14560719 ~ 14561249 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 263096 13306495 ~ 13309430 (+)
G51939 NA other upstream 314886 13253814 ~ 13257640 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other upstream 347580 13222320 ~ 13224946 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 579801 12980804 ~ 12992725 (+)
G51812 NA other upstream 645732 12925238 ~ 12926794 (+)
G52349 NA other downstream 899917 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 945814 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 1156445 14738449 ~ 14754644 (+)
AMCG00008920 NA other downstream 1201039 14783043 ~ 14795184 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other downstream 1225293 14807297 ~ 14811757 (+)

Expression


Co-expression Network