AMCG00008872


Basic Information

Item Value
gene id AMCG00008872
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13638657 ~ 13643375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008872
ATGCGGAGCTGTGTGGTGCTGGCGATGCTGTCGCTCATGGTGGCTTTCCAGTCATGCCAGTCCAGCTGCGACGACCCACCGGAGCCGCTTAGCTCCGAGTTACAGGGCACCCCGAGCCTGAACACCCTGCCACGCGCATTTCTCAAGAGGTTCTATGACGGCATCAACTATGACGGCTTCGTGGGGCTGATGGGCAGGAGGAGCGCCGGTGAGTGAGACATGCATGATTTCTTCGTGGGACTGATGGGCCGCAGGAATACGGAGTCCGGGAACCCAAGCCCGCTGAGAAAGGAGCCCTACCCCGAGTCAAGAGGAAGCATTTTCCCCAACAAGTGTAAAATGAGGTTCCGCCGAGCTGTGTAG

Function

GO: NA

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008872 True 363 mRNA 0.59 5 13638657 13643375

Neighbor

gene id symbol gene type direction distance location
AMCG00008873 NA coding downstream 29709 13585087 ~ 13608948 (-)
AMCG00008874 NA coding downstream 53826 13580416 ~ 13584831 (-)
AMCG00008869 NA coding downstream 98371 13537993 ~ 13540286 (-)
AMCG00008866 NA coding downstream 151038 13480978 ~ 13487619 (-)
AMCG00008865 NA coding downstream 165441 13459561 ~ 13473216 (-)
AMCG00008878 NA coding upstream 77335 13720710 ~ 13734038 (-)
AMCG00008879 NA coding upstream 94507 13737882 ~ 13771390 (-)
AMCG00008882 ddx23 coding upstream 187832 13831207 ~ 13839926 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding upstream 223279 13866654 ~ 13881491 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding upstream 247905 13891280 ~ 13897417 (-)
G52019 NA non-coding downstream 182805 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 199031 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 338374 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 381038 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 422662 13214272 ~ 13215995 (-)
G52131 NA non-coding upstream 128185 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 179738 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 362352 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 483864 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 628599 14271974 ~ 14275087 (-)
AMCG00008860 NA other downstream 313430 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 329232 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 376835 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 454301 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 540723 13090537 ~ 13097934 (-)
G52099 NA other upstream 41960 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 295076 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1050455 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1197332 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1388972 15032347 ~ 15057206 (-)

Expression


Co-expression Network