AMCG00008874


Basic Information

Item Value
gene id AMCG00008874
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13580416 ~ 13584831 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008874
ATGCTGGAAAAGACAgGGTGCGACAGAGAAACGTGGGGAATcctttttttgtactttgtaaatAATCCGTTCACTTTCTCATTTcggttttgcttttgcactttcTCTCGAAGTGCCACAATCACGGCAGCAGGGTTTAGCCGTTTCGGTTCGCTTGTTGATTTCCCTCCTCTGGCTGGGCTGGATTTGGGCCGGAGTGCGGAAGGGTCGGCCTCCTGGGGAAATTCTCCAGGACGCTCTGTCACACTACAGCAGCCAAAGCTGTCAGTGTTCACAGCCAGCTGGCCGGCTGCTGTCTTCTACCGAGTGACTGGAGGGTTAGAGCCTATTCATCACCATTTACTGACAGCACACACGCCCCCGCACAGAAACACTCTTGCACAAACAAGATATGAAGGGAATTTGGTTGGCTTTGTTGGTGCAGTTTTGTGTTACACACTGTTGTGTTATGCAGTGCAGGAGCACTTTACTTtccaccccccagcccccatGTTAAAATCTGAGTGGCATATGGCAGCTGGACAGGGCATTCTGCACTGGACATCTCTAGCCCTGTTGATTCAgttctttgtgttgtgtgtttttgcttctGTGCCAATTAGTAAAATATTGTGCATGCTTCCGAGGGAAAGCCCTGAGGTTGACCGTGCCAGTTCAGCAAGGGGAACAGGTGCCGGAATGAGGAAACGGGCGCTGCACAGAGCCGGGCCCAGTGGAGGCTGCACAGGGGATCAGGGTGCACTTATTGTCGGGTTTACGAGTTTGTTATTTGCGAATCATTCTTTGCAGTGCAGTACACGCATTGACGCACAGTTCCTTCTGAAAGCATGGGACCAATATCTTGCTCTGCTTCTCCTACTGGTTGGGCGCTTGCTTCTGGTTTTAAGATTCTGTGCAAGGAGAAGGCCCATTTTTCAAACCCCCTCCTGCCGTGATCAAGCCCAGTACTCGGACCTATCTTTGCAGTATTTCGTGACAGTTCGCAAGCAGGTAGCTGCCATTCCTATAATAAGGCGAGAGCTGCAGCCTTTGGCCCAGAATGGAAATGTCCGCCCAGCCTCAAACCCAGACAGTGGTAGTCTTCTCGGGGGATTTCTCCTGAGGGTCATAGGCACAGAAACGGGACgggatgggggagagagagagagagaagtcaaCATTTCTAGGCTGATGCTgattttgTGGCGGGATCAGCCATACCTTCTGCTGCTGGATGTGGAGCACGGCGTCGTGGACGGTCACAAAGATGTGCTGGGGGCTCATCTCATCAGGCCACTGGATGTCAGGATCTTCAGCACACTCTCTGCAGACgacaacacacacacggctGTCGTGAGACTCTGTTCGCAGTCTGGTGCGTGTGTTTATACTGTGCTGCTTTTTCAATCAACGCACGCTGAAGGAAATGGCACGTCTGCCCAGGCTCATGTGCAGTGCCAGCCAGAGGCGCTCGTGTTGTTGTGCTTTGTTTCTTTGAACCAGTTCACATTTGTAACACGGGAAATGCCGCTAATGGCCAGACAAAGCAGCTTCCTCCCCCCTACCCACCTCCCCTGGAGCTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008874 True 1566 mRNA 0.52 10 13580416 13584831

Neighbor

gene id symbol gene type direction distance location
AMCG00008869 NA coding downstream 40130 13537993 ~ 13540286 (-)
AMCG00008866 NA coding downstream 92797 13480978 ~ 13487619 (-)
AMCG00008865 NA coding downstream 107200 13459561 ~ 13473216 (-)
AMCG00008864 acvr1ba,LOC108275853,LOC107716207,LOC107695803,LOC107708859,LOC107563637,LOC107570552 coding downstream 124287 13439922 ~ 13456129 (-)
AMCG00008859 NA coding downstream 249414 13328969 ~ 13331002 (-)
AMCG00008873 NA coding upstream 256 13585087 ~ 13608948 (-)
AMCG00008872 NA coding upstream 53826 13638657 ~ 13643375 (-)
AMCG00008878 NA coding upstream 135879 13720710 ~ 13734038 (-)
AMCG00008879 NA coding upstream 153051 13737882 ~ 13771390 (-)
AMCG00008882 ddx23 coding upstream 246376 13831207 ~ 13839926 (-)
G52019 NA non-coding downstream 124564 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 140790 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 280133 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 322797 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 364421 13214272 ~ 13215995 (-)
G52131 NA non-coding upstream 186729 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 238282 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 420896 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 542408 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 687143 14271974 ~ 14275087 (-)
AMCG00008860 NA other downstream 255189 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 270991 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 318594 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 396060 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 482482 13090537 ~ 13097934 (-)
G52099 NA other upstream 100504 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 353620 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1108999 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1255876 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1447516 15032347 ~ 15057206 (-)

Expression


Co-expression Network