AMCG00008876


Basic Information

Item Value
gene id AMCG00008876
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13734974 ~ 13738084 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008876
CAGTTCCGCAGGTGCCTCGCGCGGGTTCTCCCTTTCCATCCCGATGTACCCGGATGTTTCTGTGTGGGATTTACTGGGGTTCCACCACCCGGTCCCGTTCGTCTcctatttacaaaaaaatgccATTTTCATACGGTGTACCTCTAAGCTGGGCAACACGGAGGGGCCTCTGCAATATCAGTAACAAGCCACCTGTCAGCGCTCTGGACACCTGTTTGTATAGTGTTTTGCGTAGGCAAATATTCAACGACTAGgtacagatttaaaacaaaacaaagaaatacgTTTTTTCTCTTAATCATCAATGTATGGACTTTAATATGGGATAATTAAACGAATAACTGAAATTGTTCGTATAATGTTTGGAATTGGAAACCCAGCCTTGTGATTGGCCACCAGAGCCTGACGTCAAGCTCCTTGGTTGCCATGGTGGCGACGTAAACAAGGCGAGTCGGCGCGGAAGAGTCGCGCTGCGCAGCCGCTGTGCTCCAGGAGGAACATGGCCTTTTTCGGACTCACCTACATGGGATACCAGGACCCGTTCAGATCCAGGAGTTTGTCACAGACGCAGAGGACACGGTCGGGACAGGGTGGCGAATCGCTGAGTGAGGGATCCAGACTGCCCCCAATCCAGACGGAGGCCAAGCCCCCCACCAGCAGCCTGGAGACACACCGTGGCAGCCAGCAGAGGCACCAGGACATGGTCCGACTGGCACGCACCCCGCAATCACCCAACCAGATGTACCGGACACCGTTGACCAACGGGCAGTGCTATGGCTGGTGGTTGCAAGGGAGCGGGCAGACTGGCATCGCGGACACAGAGCCCTGGACCCAGGTCCAACGCTTTCCCCGGAAAGACAGCGAGATGACACGGTTCGTCAAGGAGATGTCCATGACCAATCGGCAGTTCAGCTTATACTGACCCGCCCCCCCTCCTCAGCCAACAACCAGCTCTGGGAGACTTAAATTTAAACTCGCCCCCGCCACCTTACCCAACAGACACCTCTCTGCTCCTTCAGTGTTGGGACCAGCATCCGGCAGCATCAGAACTCTGCTTATGTCTGCCAACACTTCCTCCTGGTCTGAATAAAAGATCCTTGAATTtttgttgctttctttcttttggacAGAACTtgaccccccaccctccctttAGAGGCATAAGAGAAGTATACACGCCCCCTTAGTAACACACTATTCACGATTCACGATTGAGAAGGAGTGTCAGAAGGAAGAGGAAAatggacattattttaatttcagtgaaatactgtaaaacaaacaaccaaaacaaagcagaacaaaGTCACCTTAAACAGCttcatcaattaaaaataagccATTGCTGCCCTCTAGGGGCGAGGCAAAGTAAATGCATTTCGCAGCATTCTGGTGCTGAAATTAAATCAGTGAGGGGGAGGAGAGCAGGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008876 True 1434 mRNA 0.51 4 13734974 13738084

Neighbor

gene id symbol gene type direction distance location
AMCG00008877 NA coding upstream 14725 13688767 ~ 13720249 (+)
AMCG00008875 NA coding upstream 49069 13684568 ~ 13685905 (+)
AMCG00008870 NA coding upstream 96728 13629173 ~ 13638246 (+)
AMCG00008871 NA coding upstream 106497 13617051 ~ 13628477 (+)
AMCG00008868 LOC106567041,LOC103368469,LOC105013543,LOC100705688 coding upstream 152970 13572526 ~ 13582004 (+)
AMCG00008880 cacnb3a,LOC107724200,LOC107696997 coding downstream 77341 13815425 ~ 13823056 (+)
AMCG00008885 NA coding downstream 161207 13899291 ~ 13904755 (+)
AMCG00008886 LOC107737655 coding downstream 168218 13906302 ~ 13921627 (+)
AMCG00008884 NA coding downstream 204739 13942823 ~ 13948990 (+)
AMCG00008883 NA coding downstream 219284 13957368 ~ 13983630 (+)
G52100 NA non-coding upstream 47194 13686839 ~ 13687780 (+)
G52044 NA non-coding upstream 257996 13476750 ~ 13476978 (+)
G51970 NA non-coding upstream 419922 13313590 ~ 13315052 (+)
G51969 NA non-coding upstream 422516 13311329 ~ 13312458 (+)
G51968 NA non-coding upstream 424201 13309616 ~ 13310773 (+)
G52234 NA non-coding downstream 390403 14128487 ~ 14128691 (+)
G52361 NA non-coding downstream 804555 14542639 ~ 14545754 (+)
G52364 NA non-coding downstream 814812 14552896 ~ 14553241 (+)
G52372 NA non-coding downstream 822635 14560719 ~ 14561249 (+)
G52374 NA non-coding downstream 824361 14562445 ~ 14562710 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 425544 13306495 ~ 13309430 (+)
G51939 NA other upstream 477334 13253814 ~ 13257640 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other upstream 510028 13222320 ~ 13224946 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 742249 12980804 ~ 12992725 (+)
G51812 NA other upstream 808180 12925238 ~ 12926794 (+)
G52349 NA other downstream 743837 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 789734 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 1000365 14738449 ~ 14754644 (+)
AMCG00008920 NA other downstream 1044959 14783043 ~ 14795184 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other downstream 1069213 14807297 ~ 14811757 (+)

Expression


Co-expression Network