AMCG00008879


Basic Information

Item Value
gene id AMCG00008879
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13737882 ~ 13771390 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008879
ATGAGCTGCCTCAGGGACCCGGAGGCCATGGAGCCCCCTCCCCAGGCCCCGCACCACCACCATCGCGGCAACAACcgggcagggggtgggggtggcgtAGGAGGAGCCGGGGGAGGAGCGGGGGGCAATTTCGGCCTGCGCTGCGTCTGGCAGGAAGATCACTACGGGAAGAAGGGTGGCGCTGGAGAAGTGGGGTTGAAATCGGTGGACTTGGGGTTTGAGGACGGGGAGGCCAAGGGCAGGAAAGGAGGAGCGGGTGGAGCCACCGCAGGGGCTGACGGAGAAGATGGcggtgggggggcagcagctGGCGCTGTGTCGGCGGCGGAGTGCTGGTTGCGGGTGGTGCGCGTGTTCCAGTCAAAGAAGTTCCAATCGCCCAAGCTGGAGCGGCTGTACCAGCGCTACTTCTTCCGGCTCAACCAGAGCAGCCTGACCATGCTGATGGGTGTGCTGGTGATGGTGTGTGGCGTGATGCTGGCCTTCCACTGCGTGCAGGGCGGCCCCCATGTGGCCTACGCCTGCGTGCTCTCCGTCGCAATGGCGCTCTTCCTGGCTCTCATGGTGGTGTGCAACCGCAACGGCTTCCACCAGGACTACATGTGGATCGTCAGCTACCTGGTGATCGGCGTGTTGTGCGTGGTGCAGACGCTGGGCGTGCTCGTGGTGGCACCACGCTCCGCCTCCGAGGGCATCTGGTGGTCCGTCTTCTTCATCTACATTATCTACACCCTGCTGCCCGTGCGCATGCGGGCGGCCGTGCTCAGCGGCGGCGCCCTCTCCACCATCCACCTGGTGACTGTCTGGAGGCTCAACCTGGAGGATACCTTCCTCTGGAAACAGgCTCATTTTATTGTTCGTAAAGTGCCTATTCTCCTAGGCTGCAAGGCTAGGGTCAGGTTAAGGATCACAGTCCAGGCTCCTGCCAAGGGTTTGACCGCTGTGCTGAGTGCCAATGTGCTGATCTTCCTGTGCACGAACATCATTGGAATCTGTACCCACTACCCGGCCGAGGTGTCGCAGCGCCAGGCCTTCCAGGAGACGCGCGGGTACATCCAAGCCCGGCTGCATCTGCAGAGGGAAAACCAGCAACAGGAGCGGTTGCTGCTGTCAGTGTTGCCGCGGCACGTTGCCATGGAGATGAAGGCCGACATCAGCAACAAGAAGGAGGACATGATGTTTCACAAGATCTACATCCAGAAACACGACAACGtcagTATCCTGTTTGCAGACATCGAGGGGTTCACAAGCCTGGCGTCCCagtgcacagcacaggagctgGTGATGACTCTGAATGAGCTGTTTGCACGATTCGACAAGCTGGCATCGGAGAACCATTGTCTGCGCATTAAGATTCTGGGGGATTGTTATTACTGCGTGTCAGGCCTCCCAGAGCCCCGTGCTGACCATGCTCACTGCTGTGTGGAAATGGGCGTGGACATGATCGAGGCCATCTCgctGGTGCGCGAGGTCACAGGAGTCAACGTGAACATGCGTGTAGGGATCCACAGTGGTCGAGTGCACTGTGGGGTCCTGGGATTACGCAAGTGGCAGTTTGATGTGTGGCGGATCCACATCACCAAGGCGACGCTGCAGTACCTGAACGAGGACTACGAGAAGGACGAGAAGGCGGTAATGGCAAAGATGCAGAGGGCACGGGCAAACTCCAATGAGGGGCTGGTGCCACGCTGGGGTATTGATGAGACCTCAAGCAAGGACAATCGCAGTGCTCAGGAGACGATGAACCCCGAGGACGAGGTGGACGAGTTCCTGGGCCGGGCCATCGACGCCCGGAGTATCGACCAGCTGCGCAAGGACCACGTACGCAAGTTCCTGCTCACCTTCCAGAACCCTGTCCTGGAGAGAAAGTATTCCAAGAAGGTGGATGATCGGTTCGGGGGCTATGTGGCCTGTACCCTGCTTGTGTTCTGCTTCATATCCTTCATCCAGATTGTCATCTTCCCCCACACCCCCCTAATGCTGGGAATCTACATCACCGCCATGCAGACCGTGTCAAAGAAGATCGTCCAGTCGCGGACCAACAGCACTCTGGTGGGCGTGTTCACCCTCATCCTGgtcttcatctccgccttcatCAACATGTTTGCCTGTAACACAGAGCGGCTGCAGGACTGTGTGGCGAGACAACTGAACACCTCCGCCCAGCAGGTGACGCTGTGTCAACTCAACAGACTCACACGGGGCCAGGAACAGGCTCTGTGCCCTGGGGCCCCATCCTGCAACTTCCCcgagTATTTCAGCTACAGTGTGCTGCTGACCCTGCTGGCATGCTCGGTGTTCCTGCAGATAAGCAGTATTGGGAAGCTGGCTCTGATGCTGCTGATCCAGTTGGGCTACCTGGTGCTGGTGGAGTGGCCCGAGGTCGCCCTCTTCGACAATGCTGACCTCTTCGTCTCCGCCAATGCACTGTCTTTCAATGAAACTCTGGAGTGGTCCTTCATAAACGAGACATTGCAATGCCCAGAGACCGTGACCAAGGTGTCTCTGAAGGTGATGACCCCAGTGATCCTGACGGTGTTCGTGCTAGCCCTGTACCTCCACGCCCAGCAGGTGGAGTCCACTGCGCGCCTCGACTTCCTGTGGAAACTGCAGGCGActgaggagaaagaggagatgGAGGAGCTGCAGGCCTACAACCGGCGGCTGCTCCACAACATCCTGCCCAAGGACGTGGCTGCTCACTTCCTGGCACGCGAGCGGCGCAACGACGAGCTGTACTACCAGTCCTGCGAGTGCGTGGCTGTCATGTTCGCCTCCATCAGCAACTTCTCCGAGTTCTACGTGGAGCTGGAGGCCAACAATGAGGGCGTGGAGTGCCTGCGGCTGCTGAACGAGATCATCGCCGACTTCGACGagATCATCAGTGAGGAGAGGTACCGACAGCTGGAGAAGATCAAGACGATTGGCAGCACGTACATGGCGGCCTCCGGACTGAACGACTCCACCTACGACCGGGAGGGCCGCTCGCACATCGTGGCGCTGGCCGACTACGCCATGCGTCTCATGGAGCAGATGAAGTACATCAACGAGCACTCCTTCAACAACTTCCAGATGAAGATCGGTacggaggagagggagaaggaggtggtgGTCACCACAGACTTGTACCAGGTATTGGCGAGCAAAGGTTACCAGCTGGAGTGTCGCGGCGTGGTGAAGGTGAAGGGGAAAGGCGAGATGACCACCTACTTCCTGAATGATGGCCCCCAAAGCAGTTAGCAGCGGCCACCAATCCCCCAGTGAagttggggggaggggagggcagCTGGGGAGAGGGGAGCTCACCGAAACTTGAAGGAGTAgcgaaacttttgaacaaaacaaaaaaaggctcCTGACAGACTTTAAGCCCGGCGCGGCGCGGCCCGGCCCGACTGTGTGGAGGAAGGTGTATCTGGGATGAACTTTTGATTATAAGGTGTCGGATTTTGTCGACACACATTGAAGACAGATTCcatcttgtttattttcccgCTCTGCTGCCGTCATGTTCTCAGCTTCCATTGCGAGATACGTGAAcgcattcaaaaacaaaataaaaaatcaaaacaccTTTGCAAATGAAGACCTTTCACCTCCGAAGGACTGTACATAAAGACTGATGTTTCATTCTGTTTCAGGAGAATTATAAATACAGGTACTTCTGTTCCAGTTCAGGGGTCGGGGActcgttatttatttttcattggaaatgttttttttttttttttttttggcttttttaactcctttcaaaaatatatgggaaaaaaatgtaaagagaacatttttaaaaaatgaccaaagaacaaaatatttagtACAAGAAAGTTGGGATCCATCtgattagtttttattttgactgaTGATTCAGAATCCGTTTCTAGTGTTCGTATAAGAGGCCCGGCACTGTTTGACATCCTCCCACAGattttagtatattttatttttttagttctcTTATTTTGGGGGGAAGTTGCAAAGCAGGGGGGGGCACAGTAATACCACTTTCTTAGGTtagaatatttagtttttttgtttgtgtgttcatttttatttattttttggctcCTGATCAGCCCATCACAGAAATCAAAGACATcactgatgtttttgttttcttggcttTTTCCTAAAAattgatgataaaaaaaaaaaaactttgagaaataaaacaaaaacaaaacgcctTCAGCCTTGCTTTTTAAACCTACTGCAAAGCCAGTGCGGCCTACAGGCCCAGAGTAAACAATGCAGCCTGGGTCTCTATTTTTATGCTACTCACAAGGCCTCTGGGACACATTCTTCAGGATCCCGCCTGTCAGAGACTCAGCAACAGAGGCcatgtccgtctgtctgtctgtctgtccgtctatctgtctgtctgtctgtctgtctgtttatacCTGCTATCAGTGACCTTTCTTCTCTTTCAAAGAAGTATTTTttggtacaaaacaaaaaacctgaaaaaaattaaaacacttgaCTGGAGTGGAGACGCACGACCTTGTGAACGCTGATGATGGACGTCACGGTACCAGACAGAATACAGCCAAACTCTTAAACAAAAAGAGATATTTCTTTTGGAttttttgtgttccttttttttttttaaaggatatatatatatattaatatatatattaatatatatattatgactGAATACTGTGCTTTATAATCTTCAAGGGGCATAACTGTTTTCACTGTGAGGTTTCTTTGATACAATGAGAAATTGCTCTCTTGCCAAACTTATTGCTCTGAGGCATGATGGATTGTGgtatcttttaattttgttttggctgttttattttattttgtgttttaatgttggGTCATTTTTTATCATCTCtgtattaatctttttattattattattattattattattattattattattattattattattattccattccAAATGTAAAAGGATCAAAGACCAGAACTGTGTGTAGGTGGTGAGGTTAGCACCAGCTCTGCCAGTACAGTGTGATCAAATGCACAGTGGACGGACACCTGTCTACACCTCCTGGCACCATTTGGACTCCCATTATCTGTTAACCTCACCGAACTGTTCTGCCCATTCTGCCAACACCAAGTGGAGCATATGGGGGATTGGGGGGGCTTCTCTTGCCCCTGACAGCACCCATTCAAAGACAgggcgtgtgtgtgtcattctGCGCTGTAATCCGGTACAAGCATGCTGCGTTCTCCGACGTACGTGTATTTTTTATAGCCCCAGCCAGTCTCCCTCTGGTCCTGGTTTTGTGCTGTCACCGTGCATCAGTTTACTGCGAGCAAAGGGAagtaaagcaaagaaaaaaaaacattttagagaacaaaaacaaacaaactcatgAGAAGCCCCTAGAAAACGTTGGTGTACTCTGGTTGAATTTCCACTGGGCGGTGTGGTGACAGCATCATGTAATCGGGAGTCCATTCTCCTATGTTTTTctaggacttttttttttttacttttctggGATCAATTTGTCTCTGCTGGGAGCCTAGTGAGGGGCGAGGCCAGGGCAGGCCGGCTCTGTGCAAGGGCATCACTCATGCTGTTTGTATCAAAAGGGCAGCCCCTGTAAGCGgagtgtctctctgtccctctctctcaactctctcctttctctctctctctgtcagaggTGGCTGTGCCACATTGCAGTTGATCACACTGGCGCCTTGTGCTTGTGCCAGCCTGGACcctggtgctgtgctgtgggtAGAGCCGCCTGTGTCTGTCTGGAGTGTGTGAGCGTGCCAGTGACAGGAGCAGCTATTTTTGGGAGCATGGTGGGGGCTGAAGGTATTAATAAAGCACTAGAATACCGCTAACTTGTATTGTTGCCCACCCACCTGTATTTATTACTGTAAAACCTAGAGCTTCATGAATCTAGTCTCAAAACCCCTCACGTCCCCTGCCCCACACACCCAGATCCACTAgtcagggggtgggggggttgaagAGAGGAGGTGTGTTTGGCTTTTTctacagaaacattaaaattgtGAAGTTATTATAAATGTTCTTTACccttgaaaagaaaagcaaaaaatgttgtatttttggtTGTTTCCTCACCccctaaaattaaataaaattaatttatatatatatatatatatattgtaaattggTCCCTTACAATGGGTGTTGCAGCTCTGGTCCTGAAGAGCCACAGTGGCCTGTCTTGCCATTAAAACTCTTACTCAATTGAGAAAATGACTGGGTTAATTAGTTGAGATCAGCCTAATCCCGGACTGTTGATTGAGACCTTGAGAGAACCATTAAAACGTTGAAGATAATTGGTgtaaaatttaattaatcaatcagacCAATTAAGTTCAAGTTGGAACAGAAGCCAGCAGAGACTGtcactgtggctctccagggaATGAGCTGGAGCCCCATTATGTAGAGCCGCTGTGAAGACATGCCATGAAGAGTGACAGCCCCCACACAGCAAGcctcaccccaccccacccagaGACAGCAACTGGGAAGTGTGCCTCACCCTCCCTGCTCTCCTCCCCCTCACTGATTTAATTTCAGCACCAGAATGCTGCGAAATGCATTTACTTTGCCTCGCCCCTAGAGGGCAGCAATggcttatttttaattgatgaaGCTGTTTAAGGTGACtttgttctgctttgttttggttgtttgttttacagtatttcactgaaattaaaataatgtccatTTTCCTCTTC

Function

GO: NA

KEGG:

id description
K08046 ADCY6; adenylate cyclase 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008879 True 6735 mRNA 0.50 23 13737882 13771390

Neighbor

gene id symbol gene type direction distance location
AMCG00008878 NA coding downstream 3844 13720710 ~ 13734038 (-)
AMCG00008872 NA coding downstream 94507 13638657 ~ 13643375 (-)
AMCG00008873 NA coding downstream 128934 13585087 ~ 13608948 (-)
AMCG00008874 NA coding downstream 153051 13580416 ~ 13584831 (-)
AMCG00008869 NA coding downstream 197596 13537993 ~ 13540286 (-)
AMCG00008882 ddx23 coding upstream 59817 13831207 ~ 13839926 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding upstream 95264 13866654 ~ 13881491 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding upstream 119890 13891280 ~ 13897417 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding upstream 245960 14017350 ~ 14021503 (-)
AMCG00008890 NA coding upstream 270383 14041773 ~ 14042907 (-)
G52019 NA non-coding downstream 282030 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 298256 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 437599 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 480263 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 521887 13214272 ~ 13215995 (-)
G52131 NA non-coding upstream 170 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 51723 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 234337 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 355849 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 500584 14271974 ~ 14275087 (-)
G52099 NA other downstream 51145 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 412655 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 428457 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 476060 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 553526 13135732 ~ 13184356 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 167061 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 922440 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1069317 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1260957 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1698284 15469674 ~ 15505517 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000021_01338516_01408458 ADCY6B, ADCY6, ADCY6A coding CI01000021 null 1338516 ~ 1408458 (-)