AMCG00008890


Basic Information

Item Value
gene id AMCG00008890
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14041773 ~ 14042907 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008890
ATGTCGGAATGCAGTTCTGCACCATCCTCCACGCTGCACGCTTACGGGGAGATGTATAGCTTCGAGAAGCGGCTCCAGACCTTCTCCGACTGGCCGTTCCTAGAGGACTGCGAGTGCACGCCGGAGCGGatggCACGTGCGGGCTTTGTGCACTGTCCCAGCCAGAGCGAGCCGGATGTCGTGTGCTGCTTCTTCTGCCTGAAGGAGCTGGAGGGCTGGGAGCCTCATGATGACCCCTGgCTTGAGCACATGAAGCGCTCTCCCCGCTGTGGATTCCTGACCCTGCAGAAGGACCCTGATACCCTGCAGGTGATTGAGTTCTTCAGACTGGAGCAGGAACGGCTTGGCACCTACATTAGGAAGATGGGTGGACAGAAGATCTCCCAGTTCCGGGATGAAGTGCACCTGACCCGGAAGAAGCTGCTGACCCTGTTCAGCAAAGACCCAGCCCGGAACCCAGTCTAA

Function

GO:

id name namespace
GO:0030953 astral microtubule organization biological_process
GO:0007507 heart development biological_process
GO:0045766 positive regulation of angiogenesis biological_process
GO:0090307 mitotic spindle assembly biological_process
GO:0030182 neuron differentiation biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0001570 vasculogenesis biological_process
GO:0007058 spindle assembly involved in female meiosis II biological_process
GO:0007080 mitotic metaphase plate congression biological_process
GO:0051311 meiotic metaphase plate congression biological_process
GO:0043523 regulation of neuron apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008890 True 465 mRNA 0.59 4 14041773 14042907

Neighbor

gene id symbol gene type direction distance location
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding downstream 20270 14017350 ~ 14021503 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding downstream 144356 13891280 ~ 13897417 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding downstream 160282 13866654 ~ 13881491 (-)
AMCG00008882 ddx23 coding downstream 201847 13831207 ~ 13839926 (-)
AMCG00008879 NA coding downstream 270383 13737882 ~ 13771390 (-)
AMCG00008904 NA coding upstream 341662 14384569 ~ 14389388 (-)
AMCG00008907 NA coding upstream 347282 14390189 ~ 14393018 (-)
AMCG00008911 NA coding upstream 449263 14492170 ~ 14495264 (-)
AMCG00008915 LOC106583168 coding upstream 527545 14570452 ~ 14587950 (-)
AMCG00008916 NA coding upstream 563069 14605976 ~ 14612227 (-)
G52214 NA non-coding downstream 35334 14005727 ~ 14006439 (-)
G52157 NA non-coding downstream 211458 13823113 ~ 13830315 (-)
G52131 NA non-coding downstream 264844 13771560 ~ 13776929 (-)
G52019 NA non-coding downstream 585921 13373383 ~ 13455852 (-)
G52233 LOC101154678 non-coding upstream 84332 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 229067 14271974 ~ 14275087 (-)
G52314 LOC105897838 non-coding upstream 318026 14360933 ~ 14365179 (-)
G52308 NA non-coding upstream 330684 14373591 ~ 14378330 (-)
G52355 NA non-coding upstream 470970 14513877 ~ 14514078 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 57880 13938451 ~ 13983893 (-)
G52099 NA other downstream 355036 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 716546 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 732348 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 779951 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 650923 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 797800 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 989440 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1426767 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1560918 15603825 ~ 15639130 (-)

Expression


Co-expression Network