AMCG00008900


Basic Information

Item Value
gene id AMCG00008900
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14143206 ~ 14144894 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008900
GGGTCCCCCTGCAGTTCCAGGTGACGTTCCGTCGGGCGGAGGGCTACCCCATCGACCTGTACTACCTGATGGACCTGTCATACTCCATGAATGATGACTTGCAGAACATCAAGAACTTGGGGCAGGAGATCCTGAGCGCACTGACCAGTGTCACCAAGTCCGTCAGGATCGGGTTTGGCTCGTTTGTGGACAAGGTGGCGCTGCCGTATGTCAGCACAGTGCGCTCCAAGCTGAAGAACCCCTGCCCCAATCGACTGACCTTCTGCCAGCCAGCCTTCAGCTTTCGCAATGTGCTGCCCCTCACCAATGATGCTGCCGAATTCCAGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008900 True 329 mRNA 0.58 2 14143206 14144894

Neighbor

gene id symbol gene type direction distance location
AMCG00008898 NA coding upstream 1292 14113461 ~ 14141914 (+)
AMCG00008892 LOC103385083,LOC103368464,LOC101482250,LOC101064460 coding upstream 34206 14103351 ~ 14109000 (+)
AMCG00008893 LOC107695795,LOC106567037 coding upstream 50802 14089653 ~ 14092404 (+)
AMCG00008889 NA coding upstream 129469 14007598 ~ 14013737 (+)
AMCG00008888 LOC107384035,LOC106518043,LOC108235781,LOC101174339,LOC108276103,LOC105937045,LOC103465370 coding upstream 137193 13985171 ~ 14006013 (+)
AMCG00008899 NA coding downstream 10926 14155820 ~ 14163655 (+)
AMCG00008896 NA coding downstream 82823 14227717 ~ 14245887 (+)
AMCG00008895 pfdn5,LOC102784983 coding downstream 105352 14250246 ~ 14253618 (+)
AMCG00008897 NA coding downstream 109405 14254299 ~ 14271663 (+)
AMCG00008894 asb8,LOC107745463,LOC107563629,LOC107681993 coding downstream 134446 14279340 ~ 14281471 (+)
G52234 NA non-coding upstream 14515 14128487 ~ 14128691 (+)
G52100 NA non-coding upstream 455426 13686839 ~ 13687780 (+)
G52044 NA non-coding upstream 666228 13476750 ~ 13476978 (+)
G51970 NA non-coding upstream 828154 13313590 ~ 13315052 (+)
G51969 NA non-coding upstream 830748 13311329 ~ 13312458 (+)
G52361 NA non-coding downstream 397745 14542639 ~ 14545754 (+)
G52364 NA non-coding downstream 408002 14552896 ~ 14553241 (+)
G52372 NA non-coding downstream 415825 14560719 ~ 14561249 (+)
G52374 NA non-coding downstream 417551 14562445 ~ 14562710 (+)
G52377 LOC108235766,LOC107384431,LOC106518056 non-coding downstream 431542 14576436 ~ 14576682 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 833776 13306495 ~ 13309430 (+)
G51939 NA other upstream 885566 13253814 ~ 13257640 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other upstream 918260 13222320 ~ 13224946 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 1150481 12980804 ~ 12992725 (+)
G51812 NA other upstream 1216412 12925238 ~ 12926794 (+)
G52349 NA other downstream 337027 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 382924 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 593555 14738449 ~ 14754644 (+)
AMCG00008920 NA other downstream 638149 14783043 ~ 14795184 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other downstream 662403 14807297 ~ 14811757 (+)

Expression


Co-expression Network