AMCG00008904


Basic Information

Item Value
gene id AMCG00008904
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14384569 ~ 14389388 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008904
ATGGCGTCTCTGAGGTTTGCCTTCTTGCTGCTGTCTCTCAGCTGCTGCCCGGCTGTGGTGTGGACTGCCACTCAAAACCTAACGTGCGGACAGCGGCCACTACTCGACTCTCCAGGAGCATCCCGTGTGGTAGGTGGGCATGATGCAGAGGTTGGGGCATGGCCTTGGCAAGTTAGCATCCAGAAGGATTCCAGACACTTCTGCGGGGGTTCCATCATCAACAGCAAATGGGTGCTCAGCGCCTGTCACTGCTTCTACCCCATGCCTGTTGTGTCTAGGCTGTGGGTAGTGGCGGGGCAGCGTGTGCTGTCTGCCAGTGAGGACAGCTCCCAGCGGCGGGGGGTGCGGCGCTTGGTGCTGAACAAGGGCTACAACAAGGTCACCCATGACAACGACCTGGCACTGCTGCAGCTGACCGAACCCCTCAGCTTCTCACTCTATGTCCAGCCCGTGTGCCTGCTGaccagagaggaagaggaggccgGGTTGGAGCTGTGCTTCATCAGCGGTTGGGGGACCACCACCTACAAAGGGATGGCTGTGGATGTCCTGCAGGAGGCTGAGGTCCAACTCATCCCAATGGAAACCTGCAACCAGTGGGACTGGTATGGTGGCATCCTGACACAACATATGCAGTGTGCTGGGAATGAGGCCGGCGGCATTGACACATGTCAGGGGGACAGTGGGGGTCCCCTCCAGTGCTACAACGAAGACTTGGATCGCTTCTACCTCGTGGGAGTGACGAGTTTCGGGGAGGGCTGTGCGTCAGTGAATCGGCCAGGCGTGTATGCCCGAGTGAGCCGCTACTACAGCTGGGTCCAATACACGCAGGATCAGGTGAGATCGGGGGTGGCCAGCATTCAGCCCTGGCTCCTGCTGACCGGTCTCACGCTCTGCACCATGGTCCAGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008904 True 915 mRNA 0.60 5 14384569 14389388

Neighbor

gene id symbol gene type direction distance location
AMCG00008890 NA coding downstream 341662 14041773 ~ 14042907 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding downstream 363066 14017350 ~ 14021503 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding downstream 487152 13891280 ~ 13897417 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding downstream 503078 13866654 ~ 13881491 (-)
AMCG00008882 ddx23 coding downstream 544643 13831207 ~ 13839926 (-)
AMCG00008907 NA coding upstream 801 14390189 ~ 14393018 (-)
AMCG00008911 NA coding upstream 102782 14492170 ~ 14495264 (-)
AMCG00008915 LOC106583168 coding upstream 181064 14570452 ~ 14587950 (-)
AMCG00008916 NA coding upstream 216588 14605976 ~ 14612227 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding upstream 264062 14653450 ~ 14666770 (-)
G52308 NA non-coding downstream 6239 14373591 ~ 14378330 (-)
G52314 LOC105897838 non-coding downstream 19390 14360933 ~ 14365179 (-)
G52296 NA non-coding downstream 109482 14271974 ~ 14275087 (-)
G52233 LOC101154678 non-coding downstream 257068 14127239 ~ 14127501 (-)
G52214 NA non-coding downstream 378130 14005727 ~ 14006439 (-)
G52355 NA non-coding upstream 124489 14513877 ~ 14514078 (-)
G52362 NA non-coding upstream 152678 14542066 ~ 14542499 (-)
G52363 NA non-coding upstream 153168 14542556 ~ 14545750 (-)
G52387 NA non-coding upstream 208579 14597967 ~ 14598418 (-)
G52421 NA non-coding upstream 342735 14732123 ~ 14733797 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 400676 13938451 ~ 13983893 (-)
G52099 NA other downstream 697832 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1059342 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1075144 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 1122747 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 304442 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 451319 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 642959 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1080286 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1214437 15603825 ~ 15639130 (-)

Expression


Co-expression Network