AMCG00008907


Basic Information

Item Value
gene id AMCG00008907
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14390189 ~ 14393018 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008907
cgGCCCACAGGTTGGGAATCACTGCTCTATTCTAAATCAGGATTTCGCCACTATGCTTGTTAGGATCTCGACGGCGCCACCCAGTGGGGGACGGTTAAATAGCATGTGCAACGTGgtgtttccaaataaataatacgtAGTGCACAGGCGCCACCGGAAGAATGCCACCAAGGAACAGGGTTTATAGCTAAATACACAAGTCGAAGTCCGCCTGGCACAGACATATTCCGTTTAGTCTGTAAAGATGTCGATCTGTATGGGAATATGCACGCTTCTTTTCAAAACGCTGTGCCTACCACTGCAGCTGATGGAGCTGGTAGGGCTTTGCGGATTGTACAAGCGCGTATTCCCCTTTCTCATGTTCAAGATCTCGGCCAACTACAACAAGAAAATGCACGAAAAGAAGAAGGAGCTCTTCGGCAACCTGTCGGAGTTCGCTAGCTCCGACGCTGGCCCGCTGAGGCTGCTGGAAATAGGCTGCGGGACCGGGGCGAACTTCCAGTTCTACCCCCGGGGCTGCAGAGTCATTTGCACGGACCCCAACCCGCACTTTGAACGCTTTCTGCACAAGAGTATGGCCTCCAATTCCCACCTGCGGATGGAGCAGTTCGTGGTGGCCGCCGGCGAGGACCTGAGGTCGGTAGGCAGCGGCTCCGTGGACGCGGTGGTGTGCACTCTGGTGCTGTGTTCCGTCCGCAGCACGCACAGAGTGATACAGGAGGCGTACCGTGTCCTGCGGCCTGGCGGTGCTTTCTTCTTCCTGGAGCACGTGTTGGCGGACCCCTCCTCCTGGACCTACTTCTTCCAGCACGTCCTGCAGCCGCTGTGGCGATACTTCGGCGACGGGTGCGAGCTCACCAGGCAGACCTGGAAGGATTTGGAGGCCGCTGGCTTCTCGGACCTGAAGCTGAGGCACATCGAGGCACCGCTGTCGCCGCTCATAAAGCCTCACGTCATGGGTTACGCGGTTAAATAACGGAGGCGGATTATTCCCCCATTTGTGAAGTATCTTTTTTTAGTGACCCCCGTGTGAATGTTGAATCCGTGATTTGTCTATGTGATCATCTTGTTAATCGTTTTGTTAATCAGAATTAAAAATCCTAGACGGCTTACTAAACGTTATACGTATTAATGGTGACGTCTCGTACGTATATATTTGCTGCTTGACCAATGGTGTtgaatttataatataaattataacaaTGGCACATTTCCCATTGAACCCTGTGGTGTAGAAGAGTGACGCTATATTGCACTACTAGGCTACCTACAGCATATTACATGTGTGACTGatgcaataaaataagttaGCCGACAGATTTGTCCTGACCCTTTTTGTACCAACCACAGCTATTCAGTACAAGAAAGTTATCCCGCAGTTATATAAACGGGTAATAAACACTAACCCACGGTCTCAATCCCACTTCCCTGAGTAAAACGTGGACTATTGTGTTTATCAAGTAGACCTAAAACTTGCCCGTACAATGTTACTTTGTATCAAGGTGCCTACTGTCTGCTCCCATTTTAACAGTTCTTGGTCGGGTGTGAGATAAACTAGTACTATGGGCGCAAATTAGAAGTAacgaattaaaaataaaatgtatcgtAAATAGGAAAAcgtaaagtaaagaaaaaaatggatgttgagattaaaaaaaaaaaaaaagcaaa

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008907 True 1671 mRNA 0.48 2 14390189 14393018

Neighbor

gene id symbol gene type direction distance location
AMCG00008904 NA coding downstream 801 14384569 ~ 14389388 (-)
AMCG00008890 NA coding downstream 347282 14041773 ~ 14042907 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding downstream 368686 14017350 ~ 14021503 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding downstream 492772 13891280 ~ 13897417 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding downstream 508698 13866654 ~ 13881491 (-)
AMCG00008911 NA coding upstream 99152 14492170 ~ 14495264 (-)
AMCG00008915 LOC106583168 coding upstream 177434 14570452 ~ 14587950 (-)
AMCG00008916 NA coding upstream 212958 14605976 ~ 14612227 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding upstream 260432 14653450 ~ 14666770 (-)
AMCG00008913 NA coding upstream 278423 14671441 ~ 14681624 (-)
G52308 NA non-coding downstream 11859 14373591 ~ 14378330 (-)
G52314 LOC105897838 non-coding downstream 25010 14360933 ~ 14365179 (-)
G52296 NA non-coding downstream 115102 14271974 ~ 14275087 (-)
G52233 LOC101154678 non-coding downstream 262688 14127239 ~ 14127501 (-)
G52214 NA non-coding downstream 383750 14005727 ~ 14006439 (-)
G52355 NA non-coding upstream 120859 14513877 ~ 14514078 (-)
G52362 NA non-coding upstream 149048 14542066 ~ 14542499 (-)
G52363 NA non-coding upstream 149538 14542556 ~ 14545750 (-)
G52387 NA non-coding upstream 204949 14597967 ~ 14598418 (-)
G52421 NA non-coding upstream 339105 14732123 ~ 14733797 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 406296 13938451 ~ 13983893 (-)
G52099 NA other downstream 703452 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1064962 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1080764 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 1128367 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 300812 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 447689 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 639329 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1076656 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1210807 15603825 ~ 15639130 (-)

Expression


Co-expression Network