AMCG00008914 (LOC105897308,LOC103368323,LOC101065051)


Basic Information

Item Value
gene id AMCG00008914
gene name LOC105897308,LOC103368323,LOC101065051
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14653450 ~ 14666770 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008914
GAGCTACGCAGTCGTCAGTTCTGGCGCGCAGTTCTGGCTGAGGTTCTGGGCTCCTTGATCTTCGTGTCAGCGGTACTGGGCTCATCAGTGCCAGGCTCGGGGGAGGGGGGAGCAGCAGGGGGAGGCCCGTTGCAGACAGCGCTGGCAGCAGGGATGGTGGCAGTGGGGCTGGGCCAGTGTTTCGGCGAGATCAGTGGGGCGCAGGTGAACCCCGCCGTCACACTGGCCTTCCTGGCCACACGCAAGCTGGACATCCTGCGGGCGGCCACCTACGTGCTGGGCCAGTGCCTGGGGGCCACACTTGGGGCCACGCTGCTCTACCTCGCCCTGCCACTGAAATCCACAGCAAAGTGCTACATCAACAAGGTCTCTCCCGAGGGCAACGCAGGCCAGGCTCTGGGGATGGAGGTCCTGGCTACGTTCCAGCTGGTCTTCACCATCTTCTCAGTGGAGGATCATCGCCGTCGTGAGGGGAGCGACCAGGGCAGCCTGGCAATCGGGTTCTCGCTGAGCGTTGGCGTGCTCACTGCATTCCGGTCCATGTCGTTCTGGCGGGCTGTGTTCGCCGAGTTCTTTGGCACCATGTTCTTCGTGTTCTTTGGGCTGGGCGCGGCTCTGCGCTGGACTACCGGCCCACACAATGTGCTGCACATCGCCTTCTGCTTCGGACTGGCTGCCGCCACTCTGATCCAGTCCATTGGCCACATCAGTGGCGGCCACATCAACCCAGCTGTGACCTTTGCGTACCTGATCGGCTCCCAGATGTCCCTGTTCCGAGCTGTCTTCTACATTGCCGCACAGCTACTGGGTGCTGTGGCGGGCGCTGCAGTGCTCTATGGCGTCACACCCACTAATGTGCGGGGAAACCTGGCGCTCAACACGCTGCACCCGGGGGTGAGTCTAGGCATGGCCACCACTGTGGAGATCTTCCTGACCCTGCAGCTGGTGGTTTGCATCTTCGCTGTGACGGACGAGAGGCGCAACGGCCGGCTGGGCTCCGCCGCCCTCGCCATCGGCTTCTCTGTCACCCTGGGCCACTTGCTGGGGATGTACTACACTGGAGCCGGGATGAATCCTGCCAGGTCATTCGCCCCCGCTGTGCTCGTCAGGAACTTCGTCAACCACTGGGTGTACTGGGTGGGCCCTATGATAGGGGGCGCTATTGGGGCTCTGGTGTACGACTTCCTGCTGTTCCCACGGATGAGGGGCCTGTCAGAGCGACTGGCCACGCTGAAGGGTAGCCGCCCCCCTGAGACCGAGGGACAGCAGGACACCCGGGGCGACCCCATCGAGCTGAAGACACAGGCACTATAA

Function

NR:

description
PREDICTED: lens fiber major intrinsic protein-like

GO:

id name namespace
GO:0002088 lens development in camera-type eye biological_process
GO:0055085 transmembrane transport biological_process
GO:0006833 water transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015250 water channel activity molecular_function

KEGG:

id description
K09863 AQP0, MIP; aquaporin-0

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008914 True 1314 mRNA 0.63 6 14653450 14666770

Neighbor

gene id symbol gene type direction distance location
AMCG00008916 NA coding downstream 41223 14605976 ~ 14612227 (-)
AMCG00008915 LOC106583168 coding downstream 65500 14570452 ~ 14587950 (-)
AMCG00008911 NA coding downstream 158186 14492170 ~ 14495264 (-)
AMCG00008907 NA coding downstream 260432 14390189 ~ 14393018 (-)
AMCG00008904 NA coding downstream 264062 14384569 ~ 14389388 (-)
AMCG00008913 NA coding upstream 4671 14671441 ~ 14681624 (-)
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding upstream 89869 14756639 ~ 14765251 (-)
AMCG00008925 NA coding upstream 100186 14766956 ~ 14770430 (-)
AMCG00008926 NA coding upstream 129580 14796350 ~ 14797477 (-)
AMCG00008927 NA coding upstream 133999 14800769 ~ 14805666 (-)
G52387 NA non-coding downstream 55032 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 107700 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 110951 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 139372 14513877 ~ 14514078 (-)
G52308 NA non-coding downstream 275120 14373591 ~ 14378330 (-)
G52421 NA non-coding upstream 65353 14732123 ~ 14733797 (-)
G52518 NA non-coding upstream 327800 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 328146 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 502552 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 571285 15238055 ~ 15239115 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 669557 13938451 ~ 13983893 (-)
G52099 NA other downstream 966713 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1328223 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1344025 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 1391628 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 27060 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 173937 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 365577 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 802904 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 937055 15603825 ~ 15639130 (-)

Expression


Co-expression Network