AMCG00008919 (zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009)


Basic Information

Item Value
gene id AMCG00008919
gene name zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14807297 ~ 14811757 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008919
ATGTCcgccaaccccaaccccaaccccaccccGTCCCATTCCTCTTCCCAACCCCTTtctcattcctcctcctcctcctcctgccactcctcctcctcatctgcACAGCCGCAGCCACCACCACCGCCGTCACCCACAGAGACGGTGCACTACATCCACTTGCATAATGCCAGCCAGTCGGTGCTGGAGCGGCTGCGTAGCCAGCGCAGCCGGGGCCAGTTCTGTGATGTCACCGTGCGTATCCGGGATGCCTCCTTGCGTGCGCATGGCTGTGTGTTGGCTGCTGGCTCGCCCTTCTTCCAGGACAAGCTGCTTCTGGGCCATTCAGAGATTGCTGTGCCACCACTGGTGCCGGCCCGCGCTGTGCGGCAGCTGGTGGATTTCCTGTACAGTGGCTCGCTGGCCGTGCTGCCCTCCCAGGCCCTGTGCATCCTCACAGCCGCCAGCATCCTGCAGATCCACAGCGTGATTGATGAATGCACACAGATTCTGCTCTCACAGCGGCCCGGGGTGGCAGGGGGTGCAGGGCTGGGAGGTGTGGCAAagcaggagggaggagggggggtgatGGACGAGTGCACACAGATCCTTCTGTCAGGGGGCACAGGgactgggtgggggggaggggtggggaaacaggagggaggaggaggtggggggaagagagggggaggatTCCAGCAGAATTTCACCTATGGAGCAGGGGTGGGTAACAGTGTGGTTGGCCCtggcagcaacagcaacagcgtTCCCCTCGGCGACAGCAGTGCTGCTCACAACAACCCACACAATATCATACACAACAGCCCACACAACATGGTGCATGGAAGCGCACACAACAGTGGTGCACAGAGCAGCGGGGGCCTTCTGGGGGATGGAGGCCTGGGCTCTGGTTCTGGCTCGGTGCTGATGAAGCCCGGTTCTGCCTGCGGGTCGGATGTGCGCTACAAACTGAGAGACCTGCTGGGCCAGTCTGCGCAGCACAGCAcccacaacagcaacagcactgTCTCTGACAGCACAGCCCTGAACACAGCTCTGAGTCCCAGTCTGCCCCTCAGCCACCTGGGCATGGACAGAGCGTACGCAGGAGAGAGCCAACTGGGGCCCGAGCCCATGATGGAGGGagcaagggagagaggaggagggggtggggggtccaTGCTGCCCCCCAGCTCTCACAGCCGGAAACAGAGGCAGCCCGTCAGACTGCAGtCGGAGGGGTATTTTGAGGATGAGGTGTTTAGCGATGGCTTCCTGCCCACCGGGTGGCaggggggggtagggggggaGGAGTCTGGATTCCCCCCCCAGGAGCTGCCCTTCGCCCCATCCCGCAGACAGAGCAACACTGCCACCTCCCCTCCCCACACCCCTACACAGGTGCTGTTCCAGTACcctgtcagccaatcacagcccaCGCAGTCATATTTCGTAGGTGGACCCATGGTGATTGACAGTTCACAGCAGGCAGTGGAACCAGTCACACAGACCCCACCTACCACCCAGATAAACCCTGTTCACCACACCCCTCCCACTTCATCCTCTGGCCCAGCCACATCCTCCCAGGGGGCAGAGACTTCATTTGACTGTAGCCACTGTGGAAAGAGCCTGAGATCCAGGAAGAACTACAGCAAACATATGTTCATTCACTCAGgcCAGAAGCCCCATCAGTGCAGTATCTGCTGGCGCTCCTTCTCCCTGCGGGACTACCTTCTGAAACACATGGTCGTGCACACGGGGGTCCGAGCCTTCCAGTGCGCACTGTGCGGAAAGCGGTTCACTCAGAAGAGCTCGCTCAATGTGCACATGAGGACACACCGTGCAGAGAGGGGTCGGGACAGGGACCGGGACCGGGACAGGGGGGGCAGGGCTTTTGTGTGTTCAGAGTGCCCTCGTTCCTTCACCCACCGCACACTGCTGGAGagacactcacatacacacactcacgcgCCACCACAACACCACACACAGGGGAGCACGCCCCGACACCCACaggggggggaggagaggagcgacagcacacacactgacactgaaggGGAGAGAgcgtagagagagagggagagagagactgaaagacACAGAGTTTCTGAAGGAGCACTGTCTCAGGTACATTATCTCCAGCTCCGTGTCTGAACTCTAACCTCCGTACCCTGCCTCCCCGACTCCCTCAGACTCATTATCTCTTATTATTACtgctattattatatatgaaataagTGCTGTAAATGACTGTGTAACTCCCCTTTCTCTAGCTCTATATCTGTCCATCAGACGTTTTAATACTgttacatgtgtatttttaattacatcaaataccatttcagttttgtatttgcaaaattacaaattgtatccTGTTTGACA
>TU65619
GCTCCAGCCTCTCAGGTGGGAGTGAGAACCGTTTCCCCCTAGTCACAGGTCGTTGATGGAGCCAACATGGTGGGCAGTGGGGTGTCAGTTTCACAGGCGCTGGGGAAAGACGAGGCGGAGTTCGTGTTTCGTGGCGtgacacaaaacacagcagagagggagagaaagagagacagagcgtCGGCCACTCGAGATAGGATCACGGCAACCCGCGGAGACACTCACCACGACAACAGCCCGGCCGTGGCTGCAGTCATCTCTGCCCATCTTGTTGCTGTAGTGCTCGTTCATGAACAGCTGTAATTAGCGACGAGACGGGTAACAGTATTGTGGACCGGCAGCATAGGGTGGCAATTATTAATCTAACAGTGATTATTGACCCCGTAATTGTAgacaaaaatgcagtaaaacgCGGAAGGACCCACGAAAGGTGACTATTTACAGCTACACAACCCaTTCCACCCACCCCATCACTCTCTCCCTGCCTACCATGTCcgccaaccccaaccccaaccccaccccGTCCCATTCCTCTTCCCAACCCCTTtctcattcctcctcctcctcctcctgccactcctcctcctcatctgcACAGCCGCAGCCACCACCACCGCCGTCACCCACAGAGACGGTGCACTACATCCACTTGCATAATGCCAGCCAGTCGGTGCTGGAGCGGCTGCGTAGCCAGCGCAGCCGGGGCCAGTTCTGTGATGTCACCGTGCGTATCCGGGATGCCTCCTTGCGTGCGCATGGCTGTGTGTTGGCTGCTGGCTCGCCCTTCTTCCAGGACAAGCTGCTTCTGGGCCATTCAGAGATTGCTGTGCCACCACTGGTGCCGGCCCGCGCTGTGCGGCAGCTGGTGGATTTCCTGTACAGTGGCTCGCTGGCCGTGCTGCCCTCCCAGGCCCTGTGCATCCTCACAGCCGCCAGCATCCTGCAGATCCACAGCGTGATTGATGAATGCACACAGATTCTGCTCTCACAGCGGCCCGGGGTGGCAGGGGGTGCAGGGCTGGGAGGTGTGGCAAagcaggagggaggagggggggtgatGGACGAGTGCACACAGATCCTTCTGT

Function

symbol description
zbtb45 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm.

NR:

description
PREDICTED: keratin, type I cytoskeletal 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008919 True 2370 mRNA 0.59 4 14808692 14811757
TU65619 False 1085 TUCP 0.59 2 14807297 14809286

Neighbor

gene id symbol gene type direction distance location
AMCG00008912 NA coding upstream 157348 14632517 ~ 14649949 (+)
AMCG00008909 NA coding upstream 314718 14488533 ~ 14492579 (+)
AMCG00008905 LOC107733585,LOC107667357,LOC108433193,LOC101485512 coding upstream 329183 14467759 ~ 14478114 (+)
AMCG00008906 LOC108433193,LOC104932970 coding upstream 351497 14419818 ~ 14455800 (+)
AMCG00008908 LOC108433193 coding upstream 392562 14414349 ~ 14414735 (+)
AMCG00008921 NA coding downstream 11546 14823303 ~ 14832837 (+)
AMCG00008928 NA coding downstream 138123 14949880 ~ 14979753 (+)
AMCG00008930 NA coding downstream 220977 15032734 ~ 15045423 (+)
AMCG00008932 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107674129 coding downstream 238938 15050695 ~ 15065008 (+)
AMCG00008936 NA coding downstream 286409 15098166 ~ 15099180 (+)
G52384 NA non-coding upstream 187014 14619961 ~ 14620283 (+)
G52383 NA non-coding upstream 200604 14606482 ~ 14606693 (+)
G52382 NA non-coding upstream 208845 14597967 ~ 14598452 (+)
G52380 NA non-coding upstream 224005 14583093 ~ 14583292 (+)
G52379 LOC108440675,LOC107667363,LOC107748408,LOC107673578 non-coding upstream 228975 14578091 ~ 14578322 (+)
G52439 chmp2a,bc2,LOC107727322,LOC107582752,LOC107552765,LOC106579304,LOC106589279 non-coding downstream 1738 14813495 ~ 14814414 (+)
G52497 NA non-coding downstream 170366 14982123 ~ 14982509 (+)
G52493 NA non-coding downstream 214961 15026718 ~ 15027582 (+)
G52580 NA non-coding downstream 312830 15124587 ~ 15125501 (+)
G52614 NA non-coding downstream 413288 15225045 ~ 15225520 (+)
AMCG00008920 NA other upstream 12113 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 52653 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 265049 14527818 ~ 14542248 (+)
G52349 NA other upstream 324042 14481921 ~ 14483255 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 1497867 13306495 ~ 13309430 (+)
AMCG00008931 pp12c,LOC106564933 other downstream 170816 14982573 ~ 15020846 (+)
AMCG00008960 rps11,rs11 other downstream 1044467 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 1083673 15895430 ~ 15910151 (+)
G52942 NA other downstream 1550345 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1768106 16579863 ~ 16587381 (+)

Expression


Co-expression Network