AMCG00008925


Basic Information

Item Value
gene id AMCG00008925
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14766956 ~ 14770430 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008925
ATGTCGATGTACTCTCTGCTGAAGTGTGTTAGAGCGGACATGAGAAAGCTCTGTCTGCCCCAGCCCGTGTGCTTGGTGCACTGCAGTGTCCCAGTCCTGGCTGCAGAAAAGGCGCTTCTGATAAAGCTGCGAAAGGCTACTGGCTACTCCTTTGTTAACTGCAAGAAAGCTCTGGACAAGTTCAGCAATGATATCAAGCAGgcgGAGAGCTGGTTGCATGAGCAGGCTCAGATGGAGGGCTGGGCCAAGGCCAGCAAGCTCCAGGGCCGGCGTGCCACTCAGGGCCTAATTGGACAGCTGCTGGGGGAGCATGGCGCCACCATGGTGGAGGTGAACTGCGAGACGGACTTCGTCGCCCGGAATGAGACATTCCAGCAGCTGGTCAGGGAGGTTGCCGCAGCTGCCATGGCCCTGAGTCACAGCGAGGCCGTCCACTCCGGCTACAACAAGAGCCTCCTGGGACCAGAGGAGCTGTCCCAGCTGAAATCAGGGGTCAACAACACCACTTTTGCCAACCAGCTGGCTCTGGCTATTGGCCGGCTGGGAGAGAACCTCACTTTGCGTCGTGCGGTGGTGCTTTCAGTACCGCCAGACTGCCATGTCGGAGGGTATGTCCACGGCGGGGGGCCAGCCTCCCCTGGGGGGGCCCTGCTAGGCCGGTATGGTGCAATGGTGGTGtacagaggtgggggggtggaggagggcCGGAAGCTGGCCCAGCACGTGGTTGGAGAGGCACCGCTCTCTCTGGGGTCACTAGACGAGCTTCCCTGCGGAGACACCGAGACGCGGCTGGTGGCCCAGAGCTTCCTGTCTGACCCCAGTCGCACTGTGGGGCAGTACCTGCAGGACCAGGATGTGCGTGTGCTGGACTTTGTGCGCTTTGAGTGCGGGGAGGGTGAGCTCTAG

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K02357 tsf, TSFM; elongation factor Ts

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008925 True 909 mRNA 0.61 6 14766956 14770430

Neighbor

gene id symbol gene type direction distance location
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding downstream 1705 14756639 ~ 14765251 (-)
AMCG00008913 NA coding downstream 85332 14671441 ~ 14681624 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding downstream 100186 14653450 ~ 14666770 (-)
AMCG00008916 NA coding downstream 154729 14605976 ~ 14612227 (-)
AMCG00008915 LOC106583168 coding downstream 179006 14570452 ~ 14587950 (-)
AMCG00008926 NA coding upstream 25920 14796350 ~ 14797477 (-)
AMCG00008927 NA coding upstream 30339 14800769 ~ 14805666 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding upstream 41444 14811874 ~ 14818996 (-)
AMCG00008929 NA coding upstream 98397 14868827 ~ 14893227 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding upstream 296494 15066924 ~ 15070781 (-)
G52421 NA non-coding downstream 33159 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 168538 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 221206 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 224457 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 252878 14513877 ~ 14514078 (-)
G52518 NA non-coding upstream 224140 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 224486 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 398892 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 467625 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 510466 15280896 ~ 15284268 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 51634 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 783063 13938451 ~ 13983893 (-)
G52099 NA other downstream 1080219 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1441729 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1457531 13307422 ~ 13309425 (-)
AMCG00008923 NA other upstream 70277 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 261917 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 699244 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 833395 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 1063610 15834040 ~ 15851810 (-)

Expression


Co-expression Network