AMCG00008927


Basic Information

Item Value
gene id AMCG00008927
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14800769 ~ 14805666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008927
ATGCCTCGTCACTGTTCGGCTGCTGGCTGTAAATCTCGAGACACAAGAGAGACCCGTAGTGCCGGCATCACCTTCCACAGGCCagtGTTGCCGAAACGCGGTAACCCACGACGATTGCTGTGGCTTTCTAACTCCCTGCGCACGGAGgttgggggggggcagtgggaCCCCCAGTCACACTTCATCTACTTCTGCTCCAGGCACTTCAAGCAGGACTGCTTCGAGCTAACCGGCGTCAGtgggtATCGGAGGCTGAAGGAGGACTCAGTGCCTACTCTATTTGAGTCTGTCTGTCGCTCCAGAACCAAGCAGAGAGGTGCCAGCCGCTCCACACGGTAA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K23208 THAP7; THAP domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008927 True 339 mRNA 0.58 3 14800769 14805666

Neighbor

gene id symbol gene type direction distance location
AMCG00008926 NA coding downstream 3292 14796350 ~ 14797477 (-)
AMCG00008925 NA coding downstream 30339 14766956 ~ 14770430 (-)
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding downstream 35518 14756639 ~ 14765251 (-)
AMCG00008913 NA coding downstream 119145 14671441 ~ 14681624 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding downstream 133999 14653450 ~ 14666770 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding upstream 6208 14811874 ~ 14818996 (-)
AMCG00008929 NA coding upstream 63161 14868827 ~ 14893227 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding upstream 261258 15066924 ~ 15070781 (-)
AMCG00008939 NA coding upstream 273399 15079065 ~ 15087219 (-)
AMCG00008938 NA coding upstream 304117 15109783 ~ 15112295 (-)
G52421 NA non-coding downstream 66972 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 202351 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 255019 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 258270 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 286691 14513877 ~ 14514078 (-)
G52518 NA non-coding upstream 188904 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 189250 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 363656 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 432389 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 475230 15280896 ~ 15284268 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 85447 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 816876 13938451 ~ 13983893 (-)
G52099 NA other downstream 1114032 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1475542 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1491344 13307422 ~ 13309425 (-)
AMCG00008923 NA other upstream 35041 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 226681 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 664008 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 798159 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 1028374 15834040 ~ 15851810 (-)

Expression


Co-expression Network