AMCG00008929


Basic Information

Item Value
gene id AMCG00008929
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14868827 ~ 14893227 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008929
ATGGTGACAACCAATCAGGAGTCTCGACCCCAGAGCAGGAAACCCCGCCCTGCCTCTCACAGGGTAGAGGACACCACTCCCCttgtcagccaatcagagagcagCACCTCACTAAgtgGACTAGCCCTGTTCCCAGATTCCCAGCCTGAGGTCCCATTGGAAGAAATCAACTTGGCAGATCTCAGCATCACTGGGGAAACCGTATCCTTGACAACCAGCATCCAATCCGAGcccaagaaaaaacagaaaaaagtgaagaaggaggaagagagaggggTGATGCTGTGGGATCAGACAGCCAAagctcctcttatcgacacaaACATGATCAACACCGACCTCCCGCCAGAGGAGGCGCTGTGTCAcTGTCGCATCACGAGGGATCGGAGAGGAGTGGAGAGAGGAGTGTACCCCACATACTACCTACATCTGGAGAGACAGGATGGCaccagagaACAAGAGacactgttctctctctatgagcggggtgggggggtgctgagcCTGGTGAACCGCCCCCCCTCCTGGAGTGAGCAGACCCAGTCCTACGTGCTCAATTTCCACGGCCGAGTCACCTTGGCGTCTGTGTTCTCTATGGACTTGCGCTTCCCTCTCTGCCCCCTGCAGGCCTTCAGCATCGCGCTGTCAGCCTTCGACAGCAAGCTGGCATGCGAGTGA

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008929 True 678 mRNA 0.56 6 14868827 14893227

Neighbor

gene id symbol gene type direction distance location
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 49831 14811874 ~ 14818996 (-)
AMCG00008927 NA coding downstream 63161 14800769 ~ 14805666 (-)
AMCG00008926 NA coding downstream 71350 14796350 ~ 14797477 (-)
AMCG00008925 NA coding downstream 98397 14766956 ~ 14770430 (-)
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding downstream 103576 14756639 ~ 14765251 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding upstream 173697 15066924 ~ 15070781 (-)
AMCG00008939 NA coding upstream 185838 15079065 ~ 15087219 (-)
AMCG00008938 NA coding upstream 216556 15109783 ~ 15112295 (-)
AMCG00008940 NA coding upstream 243176 15136403 ~ 15152205 (-)
AMCG00008937 NA coding upstream 283389 15176616 ~ 15182566 (-)
G52421 NA non-coding downstream 135030 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 270409 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 323077 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 326328 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 354749 14513877 ~ 14514078 (-)
G52518 NA non-coding upstream 101343 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 101689 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 276095 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 344828 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 387669 15280896 ~ 15284268 (-)
AMCG00008923 NA other downstream 2839 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 153505 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 884934 13938451 ~ 13983893 (-)
G52099 NA other downstream 1182090 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1543600 13316867 ~ 13325227 (-)
AMCG00008934 NA other upstream 139120 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 576447 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 710598 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 940813 15834040 ~ 15851810 (-)
G52782 NA other upstream 943762 15836989 ~ 15837801 (-)

Expression


Co-expression Network