AMCG00008935



Basic Information


Item Value
gene id AMCG00008935
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15133336 ~ 15136021 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00008935
TACAttaatactgactgactgaccggACACTACAGttcattaacactgactgactggacactacagtccattaacaatgactgactgactggacactacagtacattatcaGTGCACAAGAATGTGAGAGATAGTGGAGGTAGTGAATTAGTGGTACAAAGTCTACAATGATAGAGAgtgggagatggagagagagagaaagtgacagAGACACATAGAtagggagaaagagagacagacagagtaTCTGAGAGAACCAGGCAAACAGTCACAGATACAAGAGTGCagagtgcagtgtgttgtgtttagtttagtgtgttgtgttgggttGTGTTTTGCCGTGATGGACATTCTGGAGACAGTTGCGTATGACCGCAGGAAGCACAGACACTGGGCTGCCCCTGTGCTCTCACTGGCTCTTGTCGTGCTGTATCACAATTGGGGGCGGGGCCTGGGATGTGTGCCCTGGGCACTGCTGCTGTCTGCAGGGGGAGACGCCTTTCTGATCTGGCCAGAATACTTCCTGCATGggatggTGTGTTTCGGTCTGGCCCACCTCCTCTACTgcttctccttcctctctctttgCCGTGCCTCCTCCTGCTCCCCTTGTCACCCCCTCtacctccccctctctctcagcggTGCCTCTCTCTGCTTCTACCTCTACCTCCTTCCCTTCCTGCTGAGGAGAGCGGATGCTACCATTCTTGCCCCAGCCGTGGGGGGGTACTGCATCCTCCTTGTTAGCATGGCAACCATTGCCCTGGCGACTGGCCGACCTCTGACCTGGGGGGGCGCCTTCTTCTTCATGACCTCCGACGTTGTTCTGTCCCTCCAGGTCTTTGAGGTGCTTATTGTCCCGGCAATGGTCACCAGGGCCCGGGCCATCGTCATGGTCACCTACTACCTGGGCCAGTTGCTCATTGCCGTGGGAGATGTCAGGGCAGGAAGTGAGGTCACCGCGCTTGAGGCCAGACTGGGGCCCAAGCGGAAGAGGAAGTAGTGAGAGCCAGATAGTGATCTTTGGAACCCAATACTTCAACCCCCTCTACTGTAATATTTAATTGCCTCATGCAGCCTAGTAGGGTACAGAACaatcacacacaatacagtacagagacacagtacacacatacacagtacagtacaatacaatcaCACACAGTACAGCCTTGTTGTAGagctgttattaatgttttatatgaactgtattatgttttatattgataataatatgcagactgagcaaagtagattGATCAAGCTAGTAACAGGCAATTGTTAAGggcatatcctctggacattcttctttccactttgacttctgtttttgtatgataagagaaatgggtttgtctgaattttttctgtttgtgaaatttGTGACTgtccacagacccacatgtcttgcaatgtataaaaggctgtccacttctgctgttcaataagtctcagctgaggtagagtgcttccatgttgGGGCCATtgcaggcctggcatgttaaataaatacatttatcatctATGCATCCATACTGGGTTCTTCAcctgtacatacatattttgtgtttgggGTTTACaagtgggaaaaaaatgaaaactctgATGAAAAGGATATCCCAGCTGTATTGTAGTGTAACAcaatttgataaaataaaaatttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00008935 True 1667 mRNA 0.47 3 15133336 15136021

Neighbor


gene id symbol gene type direction distance location
AMCG00008936 NA coding upstream 34156 15098166 ~ 15099180 (+)
AMCG00008932 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107674129 coding upstream 68328 15050695 ~ 15065008 (+)
AMCG00008930 NA coding upstream 87913 15032734 ~ 15045423 (+)
AMCG00008928 NA coding upstream 153583 14949880 ~ 14979753 (+)
AMCG00008921 NA coding upstream 300499 14823303 ~ 14832837 (+)
AMCG00008941 LOC107560742,LOC106601920 coding downstream 46767 15182788 ~ 15202953 (+)
AMCG00008947 LOC107554102,LOC107730730 coding downstream 357707 15493728 ~ 15494128 (+)
AMCG00008946 NA coding downstream 371289 15507310 ~ 15513137 (+)
AMCG00008948 NA coding downstream 382160 15518181 ~ 15519179 (+)
AMCG00008949 NA coding downstream 383608 15519629 ~ 15522296 (+)
G52580 NA non-coding upstream 7835 15124587 ~ 15125501 (+)
G52493 NA non-coding upstream 105754 15026718 ~ 15027582 (+)
G52497 NA non-coding upstream 150827 14982123 ~ 14982509 (+)
G52430 NA non-coding upstream 301859 14766211 ~ 14831477 (+)
G52439 chmp2a,bc2,LOC107727322,LOC107582752,LOC107552765,LOC106579304,LOC106589279 non-coding upstream 318922 14813495 ~ 14814414 (+)
G52614 NA non-coding downstream 89024 15225045 ~ 15225520 (+)
G52619 NA non-coding downstream 100681 15236702 ~ 15236924 (+)
G52628 NA non-coding downstream 110877 15246898 ~ 15247191 (+)
G52632 NA non-coding downstream 146679 15282700 ~ 15283545 (+)
G52651 NA non-coding downstream 275980 15412001 ~ 15431601 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 112490 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 321579 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 338152 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 378692 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 591088 14527818 ~ 14542248 (+)
AMCG00008960 rps11,rs11 other downstream 720203 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 759409 15895430 ~ 15910151 (+)
G52942 NA other downstream 1226081 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1443842 16579863 ~ 16587381 (+)
G53028 NA other downstream 1536482 16672503 ~ 16673542 (+)

Expression



Co-expression Network