AMCG00008937


Basic Information

Item Value
gene id AMCG00008937
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15176616 ~ 15182566 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008937
cccccaccacacacacacacacgcagtaatgcaaataaaacaaaaatgttttgttggtCGCTGAAGTCGTAGTTATTGTGAAAGAGACGCACTTTGGCTTTGATATTGTTGGACGTGCGTAACCTGCAGTGTTTACGGTAGAGGAGGATTCCAAGATGGCCGCGCCCTAAGACGCATCCATGACACGCTGTCTGAGAGAGATACGACTCGAATCTtccagagagagggggaaagaaagaaacgAAATTAGAAATAGAGGGATAGACACCAGTGAAAtcgagaggagagagagggagagatGGCGGAAGGTCGAGGCAACAGACCACACCCCCAGAATCTGCAGGGTCTTCTGCGATTGGCCGTGGAGGCTAGCTCCGCCTCCGAAGGCAACCCTCCTCCGGAACCCATGTCAGAGGAGGGGGCAGGACTGCGTTGTCGTGGGGCGGGGCTGCTGGCCGTGTGCTGCCAGAACCACCCTGAGGTGCAGCTCCATGCACTGGCACTGGGGGCACTGCCTACCCTGCTCACCCTGGCCGACACTGACCCCAGCACCACGGTCAAAGTGAAGGCACTGTACGCTGTGTCCTACACACTGGTTTCCATGGGGATGGTGCAGCAGTTGGTGTCTCTACTACGCCCCCCCCGATGCCCCTTCCACGAGCATGTACTGGGGGCTCTCTGCTGtcTGGTCAATGGTTTCCCACGCGGAATGGCAGCATGTCGGGACCCTGCACTGCATCTGGAGGAGCTCCTGAATGACCGAGCAAGACAGCTGAAGGGGAAGGAAGAGTGCCAGgaggaGCTGGAGTTCTGTGAGCAGTTGCTCAGGTCCTGTTTCTGTCCCCTGGACCCTGAGGACAATGGCATGGACCGTTGAGCTGGGGAACCACACTCCCATTGGCCGGTCACCCTCCACAACTGCAAGCCCACTGGCTGCAAGGGCCCAGTTCTGGGAGAAGGGGGAGTTTGTATGACTGAAGTCAttaaacattgtaattacatGGGAGATAAGgggattaatattatttgtattactattattataattattatgaaacaGCAATGTACTCTGACCTTAGAAAAGtgtaaaatagtaataataataattcccattatgtttatgtattttaaattaaatttaaatcaaa

Function

GO: NA

KEGG:

id description
K09562 HSPBP1, FES1; hsp70-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008937 True 1148 mRNA 0.52 6 15176616 15182566

Neighbor

gene id symbol gene type direction distance location
AMCG00008940 NA coding downstream 24411 15136403 ~ 15152205 (-)
AMCG00008938 NA coding downstream 64321 15109783 ~ 15112295 (-)
AMCG00008939 NA coding downstream 89397 15079065 ~ 15087219 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding downstream 105835 15066924 ~ 15070781 (-)
AMCG00008929 NA coding downstream 283389 14868827 ~ 14893227 (-)
AMCG00008942 NA coding upstream 19702 15202268 ~ 15204656 (-)
AMCG00008943 NA coding upstream 119276 15301842 ~ 15328145 (-)
AMCG00008944 NA coding upstream 189979 15372545 ~ 15391050 (-)
AMCG00008945 NA coding upstream 217013 15399579 ~ 15400121 (-)
AMCG00008950 NA coding upstream 332068 15514634 ~ 15528761 (-)
G52594 NA non-coding downstream 4250 15169322 ~ 15172366 (-)
G52513 NA non-coding downstream 153488 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 170419 14994570 ~ 15006197 (-)
G52421 NA non-coding downstream 442819 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 578198 14597967 ~ 14598418 (-)
G52621 NA non-coding upstream 55489 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 98330 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 233379 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 244350 15426916 ~ 15428651 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding upstream 324682 15507248 ~ 15513223 (-)
AMCG00008934 NA other downstream 119410 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 310628 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 461294 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1192723 13938451 ~ 13983893 (-)
G52099 NA other downstream 1489879 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 287108 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 421259 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 651474 15834040 ~ 15851810 (-)
G52782 NA other upstream 654423 15836989 ~ 15837801 (-)
G52834 NA other upstream 775101 15957667 ~ 15963617 (-)

Expression


Co-expression Network