AMCG00008938


Basic Information

Item Value
gene id AMCG00008938
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15109783 ~ 15112295 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008938
CACAACGTGCGCACGCAGGTGGAGCTGATCGAACCGACCAATCCAGCGCTGCGAAGAACCATTGACAAGATGAACACCCAGGGCTgcaaggtGTATTTTGGCCGCTGGCTGATCGAGGGCGGGCCCTATGTGGTGCTGATTGATGTGGGCCAGACAGCCTGGGCGCTGGAACGCTGGAAGAGCGAGCTGTGGGACGGTTGTGGCATTGGGGTGCCCTGGTTCGACCGTGATGCCAACGACGCCCGCCGGTTGCCCGTGGCAACAATCTTCACCACCCACGCCACGCTGCTGGGACGCTACTTGTGCGCTGGCAACGTGGACTTCTACAACAACCTGAATACCTTCAATGTGGACAGGGAGGCGGGAGACAGACAGATTTACCACCGTTACTGTATGGAGCGTGCAGCAGTCCATTGCGCCCATGTCTTCACCACCGTGTCCCAGATCACCGCCGTGGAGGCCGAGAGCCTGCTGAGGAGGAAGcctgACGTGGTGACCCCCAATGGTCTGAATGTGCGGAAGTTCTCTGCGATGCATGAGTTCCAGAACCTCCACGCCAAGAGCAAGGCCCGCATCCAGGAGTTCATCCGTGGCCATTTCTACGGtcaccTGGACTTTAACCTAGACAAGACCCTGTTCCTGTTTATCGCCGGACGCTATGAGTTCTCCAACAAGGGGGCAGACATATTCCTGGAGGCGCTGGCCCGGCTGAACTATCTACTGAgggTGAATCACAGTGAGGTGACAGTGGTGGCGTTCTTTATCATGCCGGCCAGAACCAACAACTTCAATGTGGAGACTCTAAAGGGGCAGGCG

Function

GO:

id name namespace
GO:0005978 glycogen biosynthetic process biological_process
GO:0004373 glycogen (starch) synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008938 True 816 mRNA 0.58 7 15109783 15112295

Neighbor

gene id symbol gene type direction distance location
AMCG00008939 NA coding downstream 22564 15079065 ~ 15087219 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding downstream 39002 15066924 ~ 15070781 (-)
AMCG00008929 NA coding downstream 216556 14868827 ~ 14893227 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 290787 14811874 ~ 14818996 (-)
AMCG00008927 NA coding downstream 304117 14800769 ~ 14805666 (-)
AMCG00008940 NA coding upstream 24108 15136403 ~ 15152205 (-)
AMCG00008937 NA coding upstream 64321 15176616 ~ 15182566 (-)
AMCG00008942 NA coding upstream 89973 15202268 ~ 15204656 (-)
AMCG00008943 NA coding upstream 189547 15301842 ~ 15328145 (-)
AMCG00008944 NA coding upstream 260250 15372545 ~ 15391050 (-)
G52513 NA non-coding downstream 86655 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 103586 14994570 ~ 15006197 (-)
G52421 NA non-coding downstream 375986 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 511365 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 564033 14542556 ~ 14545750 (-)
G52594 NA non-coding upstream 57027 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 125760 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 168601 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 303650 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 314621 15426916 ~ 15428651 (-)
AMCG00008934 NA other downstream 52577 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 243795 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 394461 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1125890 13938451 ~ 13983893 (-)
G52099 NA other downstream 1423046 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 357379 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 491530 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 721745 15834040 ~ 15851810 (-)
G52782 NA other upstream 724694 15836989 ~ 15837801 (-)
G52834 NA other upstream 845372 15957667 ~ 15963617 (-)

Expression


Co-expression Network