AMCG00008939


Basic Information

Item Value
gene id AMCG00008939
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15079065 ~ 15087219 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008939
cagccaATGGAATTCGCCTGTGGGTACATCTACCTTCCACCCGGTCGCAGTGCGACTCTCCACAATGTCAAGAGATCCGCTCTTCTCCCTCCAACACATAAACTGAGACACAAAAGTTCCCCTCCACCAGTACCTCAGCTAATCAGGAGCCAGACTCTGGCCCCGCCCTCTACATCTACTTTTGAGCCCTTGGCCCTGCCGCAGAGCATCGCAGAACAGGAACTTGCATACAGGGACCCGCACAAGAGAGGAAGTGACATGCCCAGCTACCACAACATGTTCCCTGACCTCCACCACACCCAGAGCAGAAGCTCTCGTGATCCAGAAACCCCGGTGGTGGTGTCCTTACGACCCACAGAACTAACACCCATGCAACCAGTGAAATCACCAGGGGCAATGAGACGAGCTCTCTTGCCCCCACCAATGAGACATCAGATCCGCAGCTCCTCCCCTACCCCTCAGCCAATCAGAACTGACTGCTCCACTTCCAACCCCGAGGTAACTGGAAGTGATGTACTGACCTTTGAACCTGATTATTCCTACATTATCCCAGAAGGCAGTGGGGTGAGTCTGAAGCTGCCAGAGACTCCAGCCAATAAGAATTCATCCAAATCACCTGCCATCATAAGACCAGCGACGCAGCCATTGCCTGGCAACCCCAATGTGATTTTGGTCAGTGTGGGACAGCTGGTCACAGAGGAGATTGCAGCACAGTGTGTCGCGGGAGAGCCCGCCTCCTGTTCTCAGTGCGGCTCGGTGACAGAGGCAGTGTACGACAACGTGGTTAGCTCCTCCTCCTGTTACTACTGTGCAGTCTGGGAGGATATCAGTCATCCCACCCCCAGGCCCCCTGGACCAATGGACTGTGAAGAGCGCCTCTTCCTGTTGCCCTCTGACCCCCAGGCCGGGTCACTTGCTGCCGACCCACTGgtgctgCAGCAGTgtctcctctcttctctgtctTTTCTGTGTGACAGCACCCCCAACAGCCGAGTGGCCCTCATCACTTTCAACAACCAGGTGACAGTACATGGCGTTGGGGAGGCGGCCACTCGCTCACTTCAGGAAGCAGAGTTGATTGACATTGACTTCCTTAGTGATGTGGGGAGGAGCTTCCCAACACCGCCCCCAGTGACCAAGAGTAGAGAGAGACTGCAGAGAGAGATACTGAGGACCTGGCGGAGCAGGCTGTTAGAGCAGGGTCCACTGTGCGCAGAAGAGTGCTGCCCTGGTGGTCAGGGGGAGGTACAGCCAGGCGCAGAAAGAGACGGACGAGCAAAGGCAGCTGATGGAGAGAGTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008939 True 1302 mRNA 0.56 11 15079065 15087219

Neighbor

gene id symbol gene type direction distance location
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding downstream 8284 15066924 ~ 15070781 (-)
AMCG00008929 NA coding downstream 185838 14868827 ~ 14893227 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 260069 14811874 ~ 14818996 (-)
AMCG00008927 NA coding downstream 273399 14800769 ~ 14805666 (-)
AMCG00008926 NA coding downstream 281588 14796350 ~ 14797477 (-)
AMCG00008938 NA coding upstream 22564 15109783 ~ 15112295 (-)
AMCG00008940 NA coding upstream 49184 15136403 ~ 15152205 (-)
AMCG00008937 NA coding upstream 89397 15176616 ~ 15182566 (-)
AMCG00008942 NA coding upstream 115049 15202268 ~ 15204656 (-)
AMCG00008943 NA coding upstream 214623 15301842 ~ 15328145 (-)
G52513 NA non-coding downstream 55937 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 72868 14994570 ~ 15006197 (-)
G52421 NA non-coding downstream 345268 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 480647 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 533315 14542556 ~ 14545750 (-)
G52594 NA non-coding upstream 82103 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 150836 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 193677 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 328726 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 339697 15426916 ~ 15428651 (-)
AMCG00008934 NA other downstream 21859 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 213077 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 363743 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1095172 13938451 ~ 13983893 (-)
G52099 NA other downstream 1392328 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 382455 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 516606 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 746821 15834040 ~ 15851810 (-)
G52782 NA other upstream 749770 15836989 ~ 15837801 (-)
G52834 NA other upstream 870448 15957667 ~ 15963617 (-)

Expression


Co-expression Network