AMCG00008940


Basic Information

Item Value
gene id AMCG00008940
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15136403 ~ 15152205 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008940
ATGGGAGAGCAGGAGGGCGAGACTGTGAGAACCAGGGTGACCAAGACGGTGGTGGACGCTGATGGCACAGAGACAAAGACCACAGTTATTGCAGACAAACAGACCATGACCACCATCAAAGAAATAACCAGGGGACAAACCACATCCATCACCATGGAGACCGAGAAAGGAGAGCAGCCTGCAGAAAAGATGGAGAAAACGCAACAGAAGTCCACAGTGGTCAATGAGGATGGAAGCATTACAACAACTACAGTGATGAAAGAAGCAGACACCACGACAACCATCACACAATTCACAATGGGAGACATCACTAAGAAAACTTCAGTGGTCAAAAGAGGGGAGAAAACCACACAAACCACTCaggaaaccacaaaaaaacacaccGTGACAGGAGAAGATGGCAGCAAAACCACCACCACTGTGGTAACAAGTGACGACACCACTACAACAGTCAAAGAGGTCACCAAGGGGGACACCACAAGGGTAACCAAAGAAGTCAAGAAAGGAGACAAGCCTGTGGAGAAATCTGAAATAACCAGGAAGACATCCACTGTAGTCGATGAGGAAggcaccaccacaacaactaCGGTGGAAGAGGAAGGAGACACCACAACGATTATCACAGAAGTCACTGAGGGAGACACCACCGAGACAACAACAGAGGTAACAAAAGATGGACAAATAACAAAGACTGTCATGACAATAAGCAAAAACCCTGAGGACTACGATGACTTGTCTGAACCACAAACAGAAAGAATGACTGAAGAGATCATTGAGATAACAACTGTCAGAAAGATAGGAGATCAGTCTTCAAGCGAGGGAACAATATATGAAAATTGTGATATCACAAGGGACAAGAAAagccaaagaaaaaaatctcCAATCATCACTGAAGAAACCATAGAGAAAACCCCCATTGAAAACCCGGATGGCACCGTTACAATCATAACTGAACACACCACAGTGGAATCAACTGTCACTACTATTGAGACACTCAGAGATGTCCAGGCAGAAGACATAATTCCCAGCACCACAAAGAAATACATGGTGGTCAACGGGGATGGCAGCACCACAAAAACGACAATAATCACAGAAGGAGAAACGGTTACCACAATCACAAGAGTGAATAAAGGTGGTGTCACCAAAACCACTAAACAAGTCAAGACAAAGAACAAGCCCACACAAACCACTCAGGAaaccacagagaaacacaccATGGTGGAAAAAGATGGAAGCAAAACCACAACCACTGTGGTAACAAGTGACGACATAACTACAAAAGTCACAGAAGTCACCAAGGGGGACACCACAAGGGTAACCAAAGAAGTCAAGAAGAGGGACAAGCCTGTGGAGAAGACTGAAAAAACCAGGAAGACTTCAACTGTGGTCGATGAGGATggcaccaccacaacaactaCAGTGGAAGAAGATGGAGACACAACGACAACCATCATGGACGTCACTAAGGGAGACATCACCACAACAACCAAGAGGGTCACAAAGGCTGGGAAAACTACAACCACTACCAAAACCACCAGAAAGAggcaaataaaaagcaaaacaaaaacatttccagcTGCAGAATGGGAAAGGATTGAGGAAATCACAGAGAAAATTCCGACTGAAAATCCAGACGGCAGCATCACAGTCATTACTGAACACACCAGAGAGGGATCCACTGAGATGACAGTGGAGACACTAAGAGATATCCCTGCAGAAGAAAAACTGCCCAGCACtatcacaaaaaacacagtggTCAACGAGGATGGCAGcaccacaacaacaactgtGATCACCCGAGGAGAGACCGTCACCACGATAAAAAAAGTGACCAAAGGGGGAGTCACCAGAACCAccaaaaaaatcaacacaaaggACAAACCCACACAAACCACTCAGGaaaccacagagagacacaccgtGGTGGAAGACGATGGCAGCAAAACCACAACCACTTTGGTAACAGCTGACGACACCACTACAACAGTCACAGAGGTCACCAAGGGGGACACCACGAGTACAACCAAAGAAGTGAAAAAGGGGGACAACCCTGTGGAGAAATCTGAAATAACCAGAAAGACATCCACTGTGGTCGATGAGGAAGGCACTACCACAACAACTACAGTGGAGGAGGACGGAGACACCACCACGACCATCACGGAAGTCACTAAGGGAGACATCACCACGACAACCAAGAGCATCACAAAAGCTGGGAAAACTACAACCACTACTAAAATCAccagaaaaagacaaaagagtACCAAAAGCCAAACAAATCCTACTGTCACCGAAGAaactggaaaagaaacaatcaaaacaacGCCCATTGAAAATCCAGACGGCAGCGTCACAGTCATAACTGAACACAGCACAGAGGGATCCACTATCACTACTGTGGAGACACTCACAGACGTCCCTGCAGAAGAAACTGTTGTCAGCACCACCACGAAAAACACAGTGGTCAATGATGACGGCAGCACCACCACGACGAAAACCATCACCAGAGGAGAGACCGTCACCACGATCACAGAATTTACCAAAGGGGACCTCACCATAACCACCACAGAAATCAAGACGAAGGACAAGCCCACAGAGATTACTCAGGaagtaaagcaaaaatacaCTGTGGTAGAAGAAGATGGAAGTAAAACCACAACGACTATGGTATCAAGTGATGACATAACTAAAACAATCACAGAAATAATCAAGGGGGACATTACCAAGGTAACTAAAGAAGTAAAGAAGGGGGACAAGCCTATGGACACAATCGAATCAACACAAATTAAGAGCACAACGGTTGATGAGGACggcaccaccacaacaactaTGGTGGAGGAGGATGGAGACACCACCACGACCGTCACAGAAGTCACTAAGGGGGACATCACCACAACAACTACACAGGTCACCAAAGACGGGACAACTACATCCACTACAAAAATCACCACAAATCAGTCCAAGCCAGTAAAAGCGGAAACCTCTCCAGCTGTCACAGACGAAACCACAAAAGAAATCATCAAGACAACGCCCATTGAAAACCCAGACGGCAGCGTCACAGTCATAACTGAACACACCACAGAGGGATCCACTATCACTACTGTAGAGACACTCACAGACGTCCCTGCAGAAGAAACCGTTGCCAGCACCACCACGAAAAACACAGTGGTCAACGATGATGGCAGCACCACCACAACGACAATCATCACCAGAGGAGAGACCGTCACCACGATCACAGAGGATACCCATGACGatatcaccaccaccaccaaggAAGTCAAGACAAAGGACCAGCCCACCCAAACCACTCAGGAAACCGCAGAGAAACACACCGTGGTGGAAGATGACGGCAGCGAAACCACAACCACTGTGGTAACAAGTGAGGACACCACCACAACAGTCACAGAGGGGGGCACCACGAGTGTAACCAAAGAAGTCAAGGAGGGGGACAAGCCAGTGGAGAAGACTGAAAAAACCAGGAAGACATCCACTGTGATCGACGAGGAAGGCACCACCACAAGAACTACGGTGGAGGAGGACGGAGACACCACCACAACCATCACGGAAGTCACTAAGGGGGACATCACCACGACAACTACACAGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008940 True 3606 mRNA 0.47 3 15136403 15152205

Neighbor

gene id symbol gene type direction distance location
AMCG00008938 NA coding downstream 24108 15109783 ~ 15112295 (-)
AMCG00008939 NA coding downstream 49184 15079065 ~ 15087219 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding downstream 65622 15066924 ~ 15070781 (-)
AMCG00008929 NA coding downstream 243176 14868827 ~ 14893227 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 317407 14811874 ~ 14818996 (-)
AMCG00008937 NA coding upstream 24411 15176616 ~ 15182566 (-)
AMCG00008942 NA coding upstream 50063 15202268 ~ 15204656 (-)
AMCG00008943 NA coding upstream 149637 15301842 ~ 15328145 (-)
AMCG00008944 NA coding upstream 220340 15372545 ~ 15391050 (-)
AMCG00008945 NA coding upstream 247374 15399579 ~ 15400121 (-)
G52513 NA non-coding downstream 113275 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 130206 14994570 ~ 15006197 (-)
G52421 NA non-coding downstream 402606 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 537985 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 590653 14542556 ~ 14545750 (-)
G52594 NA non-coding upstream 17117 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 85850 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 128691 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 263740 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 274711 15426916 ~ 15428651 (-)
AMCG00008934 NA other downstream 79197 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 270415 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 421081 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1152510 13938451 ~ 13983893 (-)
G52099 NA other downstream 1449666 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 317469 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 451620 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 681835 15834040 ~ 15851810 (-)
G52782 NA other upstream 684784 15836989 ~ 15837801 (-)
G52834 NA other upstream 805462 15957667 ~ 15963617 (-)

Expression


Co-expression Network