AMCG00008948


Basic Information

Item Value
gene id AMCG00008948
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15518181 ~ 15519179 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008948
ATGACAAACAAACTGAAGTGCTGTTTAGCGGAACAGGGGCCAGAGCCTCggaaaaatacagatttcactCTGAGCACCTCTAGTGGCAGGAGACACCGCACAAGAGAAACAACTCTGGAATGTTCAGGTATTTTAGAATTGCCAACCAATTGCAGTGCTAAGGAGAGTTTCATAGATTTAATGAACAGGACGAGAATGGCAGGTGGTGGTCCCGCTGCAGAAGTAGAACAGATGCCACATGATGATGGATTAAATCACGCTCATATTCGTGGACAGGGATACAAGTATGGAGCATATATGGCTGGAAGGTATAGTAGCATGCAGGCAAGACTGAGATGCACGATCTGGCTGGGTTTGCTCTGTGTTCAGCACTTTCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008948 True 381 mRNA 0.46 2 15518181 15519179

Neighbor

gene id symbol gene type direction distance location
AMCG00008946 NA coding upstream 5044 15507310 ~ 15513137 (+)
AMCG00008947 LOC107554102,LOC107730730 coding upstream 24053 15493728 ~ 15494128 (+)
AMCG00008941 LOC107560742,LOC106601920 coding upstream 315228 15182788 ~ 15202953 (+)
AMCG00008935 NA coding upstream 382160 15133336 ~ 15136021 (+)
AMCG00008936 NA coding upstream 419001 15098166 ~ 15099180 (+)
AMCG00008949 NA coding downstream 450 15519629 ~ 15522296 (+)
AMCG00008955 NA coding downstream 80152 15599331 ~ 15608308 (+)
AMCG00008953 NA coding downstream 103639 15622818 ~ 15623403 (+)
AMCG00008952 syt1 coding downstream 114544 15633723 ~ 15640935 (+)
AMCG00008954 NA coding downstream 122512 15641691 ~ 15650273 (+)
G52691 NA non-coding upstream 4163 15513535 ~ 15514018 (+)
G52651 NA non-coding upstream 86580 15412001 ~ 15431601 (+)
G52632 NA non-coding upstream 234636 15282700 ~ 15283545 (+)
G52628 NA non-coding upstream 270990 15246898 ~ 15247191 (+)
G52619 NA non-coding upstream 281257 15236702 ~ 15236924 (+)
G52717 NA non-coding downstream 108661 15627840 ~ 15703015 (+)
G52766 NA non-coding downstream 244758 15763937 ~ 15764143 (+)
G52781 NA non-coding downstream 317806 15836985 ~ 15837809 (+)
G52798 NA non-coding downstream 360878 15880057 ~ 15895419 (+)
G52817 NA non-coding downstream 433869 15953048 ~ 15955372 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 497335 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 706424 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 722997 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 763537 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 975933 14527818 ~ 14542248 (+)
AMCG00008960 rps11,rs11 other downstream 337045 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 376251 15895430 ~ 15910151 (+)
G52942 NA other downstream 842923 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1060684 16579863 ~ 16587381 (+)
G53028 NA other downstream 1153324 16672503 ~ 16673542 (+)

Expression


Co-expression Network