AMCG00008949


Basic Information

Item Value
gene id AMCG00008949
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15519629 ~ 15522296 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008949
ATGCTGTTGCCCTCCTTCCTTATGCCTATACAGCAACTCCACAGACTCTTGAACCTCATCCACCAGTGGAGTCTGGCCCTGCGCATTATTATGGACTCACTTTCACTGGAACTTCACCTCAAGCTGCAATACCCCAAAGAGGCCAGCAGAGGCATCACCAGGAAACAGTTCAAGGCCAAAGTACTGACAGACACTGAGACCCAGATAGCTGAGTCACCTCAACAGAGAAGCAGGAGAAGACAACCTGGTGTTGTACACCACACTGCCTGGCACCAAGCACTCCCTCAACACTACACACCACACTGCCTGGcacaacacactctcacagaaCTACGCACAGGTGAGGAGGAGAGGATTTGTCCCTGCACTGAGGACACAGACAGCACCACACTGACCCTAAGCGTGTACAACAATGGCACAATGACAATCCAGGGTAGCAAGAGCTTCGGACATGGCTTCCACACACTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008949 True 471 mRNA 0.52 2 15519629 15522296

Neighbor

gene id symbol gene type direction distance location
AMCG00008948 NA coding upstream 450 15518181 ~ 15519179 (+)
AMCG00008946 NA coding upstream 6492 15507310 ~ 15513137 (+)
AMCG00008947 LOC107554102,LOC107730730 coding upstream 25501 15493728 ~ 15494128 (+)
AMCG00008941 LOC107560742,LOC106601920 coding upstream 316676 15182788 ~ 15202953 (+)
AMCG00008935 NA coding upstream 383608 15133336 ~ 15136021 (+)
AMCG00008955 NA coding downstream 77035 15599331 ~ 15608308 (+)
AMCG00008953 NA coding downstream 100522 15622818 ~ 15623403 (+)
AMCG00008952 syt1 coding downstream 111427 15633723 ~ 15640935 (+)
AMCG00008954 NA coding downstream 119395 15641691 ~ 15650273 (+)
AMCG00008967 NA coding downstream 409020 15931316 ~ 15931979 (+)
G52691 NA non-coding upstream 5611 15513535 ~ 15514018 (+)
G52651 NA non-coding upstream 88028 15412001 ~ 15431601 (+)
G52632 NA non-coding upstream 236084 15282700 ~ 15283545 (+)
G52628 NA non-coding upstream 272438 15246898 ~ 15247191 (+)
G52619 NA non-coding upstream 282705 15236702 ~ 15236924 (+)
G52717 NA non-coding downstream 105544 15627840 ~ 15703015 (+)
G52766 NA non-coding downstream 241641 15763937 ~ 15764143 (+)
G52781 NA non-coding downstream 314689 15836985 ~ 15837809 (+)
G52798 NA non-coding downstream 357761 15880057 ~ 15895419 (+)
G52817 NA non-coding downstream 430752 15953048 ~ 15955372 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 498783 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 707872 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 724445 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 764985 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 977381 14527818 ~ 14542248 (+)
AMCG00008960 rps11,rs11 other downstream 333928 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 373134 15895430 ~ 15910151 (+)
G52942 NA other downstream 839806 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1057567 16579863 ~ 16587381 (+)
G53028 NA other downstream 1150207 16672503 ~ 16673542 (+)

Expression


Co-expression Network