AMCG00008956


Basic Information

Item Value
gene id AMCG00008956
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15542462 ~ 15596322 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008956
ATGTGCCCAGCCCTCCTGACACTGACGTCACTGACATTTGAACGTCCCAGCAAGCGGGAGACTCcagagacagcagcagcagaatccCCATGCAAAAgtgaTCACCTCAAGGAGATGCTGCTGCATCAGGACTGCATTGGCCAATTTGATCTGGCCACTCATGGGATGGGGTCATGGCAAAGGTGCGGAGACTGTGCCAATATTGGGAAGCATTTCGGGAGGGTCATAGCCCGGGATTACAGGGTGAGGCAGGATGAAAGACCTCTGCCCCTggtgctgggctgggctgggtggACGAGGATGATGACAAGGAGCCATAGACAGAGAGCGGGGAATAGAGCATTGGTCACACAGTCGTCTTGGGAGAAGAGTACCAGCAGCTGCAGGACATTGGAGAGGCAGGTGGAGGGCCCATGTTGGAAGAAAGAGGAGCAGAGtgcaggtggaggaggaggaggagagatggAGCTGGATGAACAGTCGGAGATGGGTCAAAGCGAGAAAGTTGAGAaggacaggATGTTTggtaaaaacatgaaacatgacACCTTTGTTAGCACTGGTCTAACAAATTGGAAAAAAGCTCTGGATCTCTTGAAAGAGCACAAGAAAACACCTGCCCATAAAGCAAGTATGCTTTCCTGGCACAGCTTTAAAGCCAGTGCTGCTCATGGCAGTGTAATTGAACAATTGCACTCAGCAAATGAGGCAGACTGGAGTACCTCACCCGTATTtgttttacttGTAAACCATCACAAAACCAGAGATGTTCAAAATCAGCTGGGGTTACAGCCATCCGAACTTGTGCAGCTTTCAAAGACCCACTGGTCAAGCCAGTTTCGGTCTGTAAATGCCATCTTAGAGAATCTCCCTGCAGTTCTTCAGTGTCTCTCCAGCATCAACAACTCCATGGCAGTAGGACTCCATGCCAAACTTAGCAGATTCTCCACAGTATACCTATTGATAATGTTGAAGACTTTTCTGTCTGTAACCGAGAACCTGCACAAATATCTGCAAAGTGAAACAGTAGACCTTGCTAAAGCTGCTGAGTACAAAGGAGCTGTGTGTGACACTCTAAAACAGATGTGCACAGATGAGAAGGCTACTATGCTGTATGATACTGTCAGGACCATTTGTGCAGCAAATCAGATCCCAGAGCCATGTGCTGCTACTAAACAAAGGCAGAATCAGAAATGCGTGGAGGTTTATGTAGTGGACTCTAGTTGTGGAGCAGTGAGTGACCTCAGTGATGCAGAGAATCTGAAAAGAAACCTTTTACTACCTTGCCTTGACAGAATGGTTGCTGAGATGGATCAACCGAAACCCATCTGGACCAATGAGAGCAGGGCACACTGCGGACAGTCTGCACACGGGTTCTATATAGCGCCTCTCACAGCCAATGGTTCTATAAATATGGGCAAAGCACCCTTCGGTGCCATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008956 True 1443 mRNA 0.49 7 15542462 15596322

Neighbor

gene id symbol gene type direction distance location
AMCG00008950 NA coding downstream 13701 15514634 ~ 15528761 (-)
AMCG00008945 NA coding downstream 142341 15399579 ~ 15400121 (-)
AMCG00008944 NA coding downstream 151412 15372545 ~ 15391050 (-)
AMCG00008943 NA coding downstream 214317 15301842 ~ 15328145 (-)
AMCG00008942 NA coding downstream 337806 15202268 ~ 15204656 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding upstream 53222 15649544 ~ 15660496 (-)
AMCG00008959 NA coding upstream 71494 15667816 ~ 15685050 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding upstream 192223 15788545 ~ 15801373 (-)
AMCG00008962 NA coding upstream 231378 15827700 ~ 15830629 (-)
AMCG00008961 NA coding upstream 256892 15853214 ~ 15857199 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 29239 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 64525 15415945 ~ 15477937 (-)
G52683 NA non-coding downstream 113811 15426916 ~ 15428651 (-)
G52666 NA non-coding downstream 258194 15280896 ~ 15284268 (-)
G52621 NA non-coding downstream 303347 15238055 ~ 15239115 (-)
G52774 NA non-coding upstream 224864 15821186 ~ 15822218 (-)
G52793 NA non-coding upstream 263201 15859523 ~ 15863705 (-)
G52794 NA non-coding upstream 269426 15865748 ~ 15865986 (-)
G52808 NA non-coding upstream 309551 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 312342 15908664 ~ 15910151 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 36945 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 485256 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 676474 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 827140 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1558569 13938451 ~ 13983893 (-)
AMCG00008957 NA other upstream 7503 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 237718 15834040 ~ 15851810 (-)
G52782 NA other upstream 240667 15836989 ~ 15837801 (-)
G52834 NA other upstream 361345 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 467232 16063554 ~ 16073935 (-)

Expression


Co-expression Network