AMCG00008961


Basic Information

Item Value
gene id AMCG00008961
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15853214 ~ 15857199 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008961
ATGGCGGCGCCGAATGGGGGAGGCGAGCCGGGTAAGTACTGTACGACTGGAGCCGCCCGGACTGGGCTGGATGGAGCTGAGCTGTGTGACCCTGCCCATAAGCAGCTGGCGCAGTGCCTACAGCGAATTGGAGATGAGTTGGACAACAACGCTGAGTTGcaacaGATGATTAATAACTCTGCCGTTAAGCCCAGTAAGGAGGTGTTCATCCAGGTCGCCTGTCAGATCTTCTCTGATGGCAAATTCAACTGGGGCCGAGTGGTAGCTCTCTTCTACTTCGCCTGTCGCCTGGTCATTAAGgctCTGGTGACAAATGTCCCTGATTTCATTCGCACCATTATCAGCTGGACAGTGGATTACCTGAGGGAGCATCTACTGTCCTGGATCAGGGAGCAGGGCGGCTGgGAAGGTATCCGGTCATATTTCGGGACGCCCGCCTGGCAGGCAGCCGGAGTTTTCCTGGCCGGAGTACTGACAACTGTGATTGTTATAAAAAAgatgtgagggagagagggttgGGTCGGGTGAGGGGCTGGCATGGAGGATATGAAGAGGGTGATGGAGGAAAAATAGCCTTCCTCCAGAAATGACTATAGCAACAGCAACAAGGACACCACACAGCTACACAACAGCACTGTCCTCCTCGTGTATGATGTGAACAATAGAGTGAATCCCTCACTCACCTCCAGTGATGATGAGAATGACAGAACAAGAaagacacaacacaacacagctaAACAACAGCACTCCCTGTGACTCCATTACAATGTGAatgacagtgacacaactgcaCAACAGCCCTCACTCGGTTACAATGTGAATGACAGATTGGCACATCTGCATGAGGGGGAGGTAGTGGGAGAGACAATAATCCTGATAGAGGAAGGGAGATCAAAGGGAGGTGTGGAGAGGGAATGGGGGTGAGAGGGAAGGACTGCAGAGACAGCAGGGGGTCAAAGCATtgccttgtttttaattaaaattttcaAATGTTCTACTGTTTTTTAGGGGTTTTCCCCccaagaaaataatttgtaatttctaCAGCTGTAAACAAAGTGCATATCAATTCCTGTGAAACTGAATCAGCCTGGGCCAGGGTCTTACCTGAGTTTTATAATAAGGAATTGCTTTGTGTGGGGTAGTATTCTCTCTCCTATCATCATGGaaattattactatatataatttaactgtACAATTGCCTTTATTTTCTATTGgacatttttgtataattaattgttgttgttagtattatattattattattggtctGCCCTTATTTCTGCACTCTGTTTCCACTGGCAGACAGCAATTGACaagaaaatgaattacaatcaattgtaaagaaaaattaataataaaaaataaaaagtgtttttatgaaTTGGTAA

Function

GO: NA

KEGG:

id description
K02159 BAX; apoptosis regulator BAX

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008961 True 1393 mRNA 0.45 5 15853214 15857199

Neighbor

gene id symbol gene type direction distance location
AMCG00008962 NA coding downstream 22585 15827700 ~ 15830629 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 51841 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 168164 15667816 ~ 15685050 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding downstream 192718 15649544 ~ 15660496 (-)
AMCG00008956 NA coding downstream 256892 15542462 ~ 15596322 (-)
AMCG00008968 NA coding upstream 38489 15895688 ~ 15898166 (-)
AMCG00008973 NA coding upstream 359339 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 416605 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 436117 16293316 ~ 16298256 (-)
AMCG00008976 LOC107551165 coding upstream 462169 16319368 ~ 16322631 (-)
G52774 NA non-coding downstream 30996 15821186 ~ 15822218 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 339991 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 375277 15415945 ~ 15477937 (-)
G52683 NA non-coding downstream 424563 15426916 ~ 15428651 (-)
G52666 NA non-coding downstream 568946 15280896 ~ 15284268 (-)
G52793 NA non-coding upstream 2324 15859523 ~ 15863705 (-)
G52794 NA non-coding upstream 8549 15865748 ~ 15865986 (-)
G52808 NA non-coding upstream 48674 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 51465 15908664 ~ 15910151 (-)
G52812 NA non-coding upstream 73376 15930575 ~ 15931134 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other downstream 1404 15834040 ~ 15851810 (-)
G52782 NA other downstream 15413 15836989 ~ 15837801 (-)
AMCG00008957 NA other downstream 214084 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 347697 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 796008 15032347 ~ 15057206 (-)
G52834 NA other upstream 100468 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 206355 16063554 ~ 16073935 (-)
G52951 NA other upstream 547511 16404710 ~ 16405126 (-)
G53017 NA other upstream 756025 16613224 ~ 16614461 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other upstream 966596 16823795 ~ 16913299 (-)

Expression


Co-expression Network