AMCG00008962


Basic Information

Item Value
gene id AMCG00008962
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15827700 ~ 15830629 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008962
GCGCCTCGCTGGTTCTGAACCCCTCCTTTCTCTGTGTAAATCCCCGCCCCTTTCGCCGCAGTGTGCTTCTTGCTGTTTCAGTGACGTCATAGCTGTCAAAATGGCGGCGATGTCGGAATCTTTGGGGCTGGAAAGAGATGTGTGTCGAGTGATCGAGCTGCTGGACAGGCTCCAGCGCAGTGGGGAGCTGCCACCCCCGAAGCTGCAGGCACTGCAGAGAGTCCTGCAGAGCAAGTTCTGTGCCGCCATCCGAGAGACTGAGGAGGGGCTGGGCTTCAACATCATGGGTGGCAAGGAGCAGAACTCACCCATCTACATCTCCCGCGTCATCCCAGGGGGTGTTGCCGACCGGCAGGGGGGGCTGAAGAGGGGCGGCGCAGGGCTGTGTGCGAGTGGTTGTGCGTTATACCCCCCGCGTGCTAGAGGAGATGGAGGCACGCTTCGAGAAGATGAGGAGTGCCCGTCGCCGCCAGCAGCACACCAGTTACTCgTCCCTGGAGTCTCGAGGTTAGCCAATCGCATCCATGCTCTCCTGTgctgatttccccccccccctcagagAATTctgatattaatacattttcattccagaaTACAGTGTTATTCCACAGTTAACAGAAGGAGAATTAATTACAGTTATAGACATGGAAACCTAATAAGTTTGTATGTAGTGGCATCCAGTCAGTGTGTAAGGATAGTTACCTATTATCATTATGgagatgttttaatgtttgtttgggTCGTGTCAGTAGCTGAGAGAGaacaatgttaataataatgtgaaatctattcatgtttttgtttgtttgtttgtttatttatttatttatatttatttatttattaaagtgaaAATACAATGGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008962 True 867 mRNA 0.49 5 15827700 15830629

Neighbor

gene id symbol gene type direction distance location
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 26327 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 142650 15667816 ~ 15685050 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding downstream 167204 15649544 ~ 15660496 (-)
AMCG00008956 NA coding downstream 231378 15542462 ~ 15596322 (-)
AMCG00008950 NA coding downstream 298939 15514634 ~ 15528761 (-)
AMCG00008961 NA coding upstream 22585 15853214 ~ 15857199 (-)
AMCG00008968 NA coding upstream 65059 15895688 ~ 15898166 (-)
AMCG00008973 NA coding upstream 385909 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 443175 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 462687 16293316 ~ 16298256 (-)
G52774 NA non-coding downstream 5482 15821186 ~ 15822218 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 314477 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 349763 15415945 ~ 15477937 (-)
G52683 NA non-coding downstream 399049 15426916 ~ 15428651 (-)
G52666 NA non-coding downstream 543432 15280896 ~ 15284268 (-)
G52793 NA non-coding upstream 28894 15859523 ~ 15863705 (-)
G52794 NA non-coding upstream 35119 15865748 ~ 15865986 (-)
G52808 NA non-coding upstream 75244 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 78035 15908664 ~ 15910151 (-)
G52812 NA non-coding upstream 99946 15930575 ~ 15931134 (-)
AMCG00008957 NA other downstream 188570 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 322183 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 770494 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 961712 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 1112378 14693830 ~ 14715322 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 3411 15834040 ~ 15851810 (-)
G52782 NA other upstream 6360 15836989 ~ 15837801 (-)
G52834 NA other upstream 127038 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 232925 16063554 ~ 16073935 (-)
G52951 NA other upstream 574081 16404710 ~ 16405126 (-)

Expression


Co-expression Network