Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008967 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 15931316 ~ 15931979 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0009799 | specification of symmetry | biological_process |
| GO:0009855 | determination of bilateral symmetry | biological_process |
| GO:0007368 | determination of left/right symmetry | biological_process |
| GO:0061371 | determination of heart left/right asymmetry | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008967 | True | 504 | mRNA | 0.63 | 2 | 15931316 | 15931979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008954 | NA | coding | upstream | 281043 | 15641691 ~ 15650273 (+) |
| AMCG00008952 | syt1 | coding | upstream | 290381 | 15633723 ~ 15640935 (+) |
| AMCG00008953 | NA | coding | upstream | 307913 | 15622818 ~ 15623403 (+) |
| AMCG00008955 | NA | coding | upstream | 323008 | 15599331 ~ 15608308 (+) |
| AMCG00008949 | NA | coding | upstream | 409020 | 15519629 ~ 15522296 (+) |
| AMCG00008966 | NA | coding | downstream | 11178 | 15943157 ~ 15951025 (+) |
| AMCG00008970 | NA | coding | downstream | 60134 | 15992113 ~ 15992550 (+) |
| AMCG00008969 | ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 | coding | downstream | 120570 | 16052549 ~ 16054525 (+) |
| AMCG00008972 | NA | coding | downstream | 194162 | 16126141 ~ 16134060 (+) |
| AMCG00008978 | LOC108432681,LOC102199411,LOC102296518 | coding | downstream | 498838 | 16430817 ~ 16451251 (+) |
| G52798 | NA | non-coding | upstream | 35897 | 15880057 ~ 15895419 (+) |
| G52781 | NA | non-coding | upstream | 93507 | 15836985 ~ 15837809 (+) |
| G52766 | NA | non-coding | upstream | 167173 | 15763937 ~ 15764143 (+) |
| G52717 | NA | non-coding | upstream | 228301 | 15627840 ~ 15703015 (+) |
| G52691 | NA | non-coding | upstream | 417298 | 15513535 ~ 15514018 (+) |
| G52817 | NA | non-coding | downstream | 21069 | 15953048 ~ 15955372 (+) |
| G52856 | NA | non-coding | downstream | 129861 | 16061840 ~ 16063714 (+) |
| G52861 | NA | non-coding | downstream | 153549 | 16085528 ~ 16085843 (+) |
| G52863 | NA | non-coding | downstream | 166261 | 16098240 ~ 16098446 (+) |
| G52877 | NA | non-coding | downstream | 276969 | 16208948 ~ 16210044 (+) |
| AMCG00008965 | NA | other | upstream | 21165 | 15895430 ~ 15910151 (+) |
| AMCG00008960 | rps11,rs11 | other | upstream | 67646 | 15856224 ~ 15863670 (+) |
| AMCG00008931 | pp12c,LOC106564933 | other | upstream | 910470 | 14982573 ~ 15020846 (+) |
| AMCG00008919 | zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 | other | upstream | 1119559 | 14807297 ~ 14811757 (+) |
| AMCG00008920 | NA | other | upstream | 1136132 | 14783043 ~ 14795184 (+) |
| G52942 | NA | other | downstream | 430123 | 16362102 ~ 16362511 (+) |
| AMCG00008983 | NA | other | downstream | 647884 | 16579863 ~ 16587381 (+) |
| G53028 | NA | other | downstream | 740524 | 16672503 ~ 16673542 (+) |
| AMCG00008985 | NA | other | downstream | 747846 | 16679825 ~ 16726295 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | downstream | 799410 | 16731389 ~ 16737499 (+) |
