AMCG00008968


Basic Information

Item Value
gene id AMCG00008968
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15895688 ~ 15898166 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008968
ATGAACGCGCGCGTCGTTTTCTACGCTCATGCGTGCGTGCGGGTGACACAGACAGATGGGATATgtGATGTCCACAGAGATGCTGTTTTGTCCATCTGTCCTACCTGCCTCAGTCTCACGGCTCCCCTGCTCCTAACGAGGGACGAGCCGGATATCCCTGACAACCACAAAGACAGCTGGGGGGCCCTAGTCTCTGCGGCGGAGAGGTACAGCCAGGTCTCAGGGTGTGAGATGGCCCTGATTCTGGCCAGGAAGAAGTTCCGTCTGGCAGAGCCAGGGAAAGGCATGGGACAGGGGGATGGGAAGGGGGAGGTGCCAAGACCAGAGTTCACGTATCACGCCcagtctcagtgtgtgacagtggaAGGGGGCGGGACCAGCCCTGGCTCGCGCCTCTATTCACAGAGCTACCCGTCAATCTACAGCCCTGGCCTCCTCATTGGCGGGCtgaaagggaggggggggaaagagaggggggaTCTGGAGATGAacgagggagtgagggagaggccagagggaggagaagaaagagtagaggaggaggaggaggaggaggaagaggaaCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008968 True 570 mRNA 0.60 5 15895688 15898166

Neighbor

gene id symbol gene type direction distance location
AMCG00008961 NA coding downstream 38489 15853214 ~ 15857199 (-)
AMCG00008962 NA coding downstream 65059 15827700 ~ 15830629 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 94315 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 210638 15667816 ~ 15685050 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding downstream 235192 15649544 ~ 15660496 (-)
AMCG00008973 NA coding upstream 318372 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 375638 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 395150 16293316 ~ 16298256 (-)
AMCG00008976 LOC107551165 coding upstream 421202 16319368 ~ 16322631 (-)
AMCG00008975 NA coding upstream 438249 16336415 ~ 16338708 (-)
G52794 NA non-coding downstream 29702 15865748 ~ 15865986 (-)
G52793 NA non-coding downstream 31983 15859523 ~ 15863705 (-)
G52774 NA non-coding downstream 73470 15821186 ~ 15822218 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 382465 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 417751 15415945 ~ 15477937 (-)
G52808 NA non-coding upstream 7707 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 10498 15908664 ~ 15910151 (-)
G52812 NA non-coding upstream 32409 15930575 ~ 15931134 (-)
G52814 NA non-coding upstream 41930 15940096 ~ 15940302 (-)
G52831 NA non-coding upstream 46632 15944798 ~ 15950331 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other downstream 43878 15834040 ~ 15851810 (-)
G52782 NA other downstream 57887 15836989 ~ 15837801 (-)
AMCG00008957 NA other downstream 256558 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 390171 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 838482 15032347 ~ 15057206 (-)
G52834 NA other upstream 59501 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 165388 16063554 ~ 16073935 (-)
G52951 NA other upstream 506544 16404710 ~ 16405126 (-)
G53017 NA other upstream 715058 16613224 ~ 16614461 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other upstream 925629 16823795 ~ 16913299 (-)

Expression


Co-expression Network