AMCG00008970



Basic Information


Item Value
gene id AMCG00008970
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15992113 ~ 15992550 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00008970
ATGCCCACGATCTCAGAGGACAGCCGGGTGGGGGGCGGGCCGTCCTCCCCGGGAGGAGGCGGGGGAGGTGGGGGAATGGGAGGTGccggaggagggggaggaggaggcggtgGGGTAGGAGGAGTGGGGACAGGCTATGGGAACAGGGCTGGGGGTGGGGACGAGGGCGGCAGCACGGGGAACCTGGAGTCCCTGATGGTCAACATGCTGACGGAGAGGGAGCGACTGCTGGAGAGTCTACGGGAGACGCAGGACAGCCTGGGCACAGCACAGCTGCGTCTCCGCGAGCTGGGACATGAGAAGGAGTCTCTGCAGAGACAGCTGTCCATCGCCCTGCCCCAGGTGAGTGATCAGAGGGGGCTGCTGCCTGCCCAGTGGGCTCTGCAGGGTGGAGGAGAGCACAGGGGGTCTAGGGGAGTGGGAGACATCGTTTGGTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00008970 True 438 mRNA 0.67 1 15992113 15992550

Neighbor


gene id symbol gene type direction distance location
AMCG00008966 NA coding upstream 41088 15943157 ~ 15951025 (+)
AMCG00008967 NA coding upstream 60134 15931316 ~ 15931979 (+)
AMCG00008954 NA coding upstream 341840 15641691 ~ 15650273 (+)
AMCG00008952 syt1 coding upstream 351178 15633723 ~ 15640935 (+)
AMCG00008953 NA coding upstream 368710 15622818 ~ 15623403 (+)
AMCG00008969 ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 coding downstream 59999 16052549 ~ 16054525 (+)
AMCG00008972 NA coding downstream 133591 16126141 ~ 16134060 (+)
AMCG00008978 LOC108432681,LOC102199411,LOC102296518 coding downstream 438267 16430817 ~ 16451251 (+)
AMCG00008981 NA coding downstream 555067 16547617 ~ 16558958 (+)
AMCG00008979 NA coding downstream 568472 16561022 ~ 16564235 (+)
G52817 NA non-coding upstream 36741 15953048 ~ 15955372 (+)
G52798 NA non-coding upstream 96694 15880057 ~ 15895419 (+)
G52781 NA non-coding upstream 154304 15836985 ~ 15837809 (+)
G52766 NA non-coding upstream 227970 15763937 ~ 15764143 (+)
G52717 NA non-coding upstream 289098 15627840 ~ 15703015 (+)
G52856 NA non-coding downstream 69290 16061840 ~ 16063714 (+)
G52861 NA non-coding downstream 92978 16085528 ~ 16085843 (+)
G52863 NA non-coding downstream 105690 16098240 ~ 16098446 (+)
G52877 NA non-coding downstream 216398 16208948 ~ 16210044 (+)
G52890 NA non-coding downstream 250987 16243537 ~ 16244943 (+)
AMCG00008965 NA other upstream 81962 15895430 ~ 15910151 (+)
AMCG00008960 rps11,rs11 other upstream 128443 15856224 ~ 15863670 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 971267 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 1180356 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 1196929 14783043 ~ 14795184 (+)
G52942 NA other downstream 369552 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 587313 16579863 ~ 16587381 (+)
G53028 NA other downstream 679953 16672503 ~ 16673542 (+)
AMCG00008985 NA other downstream 687275 16679825 ~ 16726295 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other downstream 738839 16731389 ~ 16737499 (+)

Expression



Co-expression Network