AMCG00008973


Basic Information

Item Value
gene id AMCG00008973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16216538 ~ 16233132 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008973
TCCGTCGGAAGTCGCCGTCTGGAAGCAGTGGGTGTCGCCTGGAAAGAAAAACTGTTCGGGGGGGAACAAATCGTCGTGTTTTTCCTTCTTAGgtagggttgtgtgtgtgtgctttaacACTGCGGATATTGAACTCAGGGACCGAGGGACAGAGTTAGAGAGAGGAAAAGTAGtcatacatacaatacattctGCTTTTTGCAGGTGgcttgaaagagagagaggaacggTTAAACGATTGtcaaaacaataagaaaaacaatttaaacagttACAGAAAAGAgttagacagacagaaagaggaaAGCTTAAAATAGAAAGAGACTGAATTCCGTTATTTCGTCTCATTGTACGAATCTTCGACACTGCGCTACTGCTCAGACATATAAGCCAATAAATTAGACGGAATTAAACAgactaagagagagagagagagactgattaCACAGAGAAGGATAGCGATAGAGAGAGGAAAGGGAAAACTCGTTCATTAGCACATTGCTCGTCGATAAGTTCGTCTCGTTTCCGTGTGCGCGTGCACTTGAACTGCTTCATCTACACCAAAGCGCATTTGGGACCCAATGGCCGGCCTTACTAGCAAGACGGTGTTCGACATCTTCCAGTCTATGGAGTTCGGTCCGACCGGAGGAGACGGGACTGGAGTGGCGCAGGCCTGGTTACAGAGGCACAGCCACACTCTCGGCCTGTTTATTGGGGGGAAATTTGTGCACCCTGAAGGCAGAGAGATTGATAGCGTCACTGACTCTGCAGgtcagtcagtgtgcagtACTGTCAGGGCGGTGTTTGCTGATGTCTCTCTATCTGTGTCTGATGCCAGGGAGGGCTGTgaggtgtggggggggctgAGTTGCCATGCCCGAGCCAGACACCTGTACAGtgtggcTCGCAGCATACAGCGGTTTGGTCAGTCTCTGTCTGCAGTGGCCCAGCTGCAGTGCAGCCCGGCTGACCTCTCAGCGCTGACAAGGCTCCTGAGACTGCCCCCTAGCAACACAGTGGTGCTGCGGCCCTCCCCCCAGGCACGCCTCACCTCACTGCTATTGGCCGAGCTGTGCACTGGGGCCGGACTGCCGGCTGGTGTTCTGAATGTCATCACAGGTGATGACCTCTCTCTGGCGGTCGCGTTGGCTGAGCATTCCGAGGTCGACATGGTGACAGTTACTGGGAGGAGAGAggaaGGGTTGGTGTTGGCGGGAGCGGCGGCTGCAGGgggtgtccctgtgtctctgtctgtggggGGGCTTTGTCCCTTTATCATCTGTGACTCTGCTGACCTGGACAGTGCTCTTTGTCAGTGGCAGCTGCTGGTACAGGAGGCCGTGTGGGAGGCTGTGAGAGTTAGGCTACAGGAGAGGATTGCAACACTGCGCTGTCTCCCCCTGGTGGACACAGCAGTAAAGTGTGTTCTGGATGCTGCAATACAGGATGCTGTCCAGCTGGCCTCCTGTGCCCCCTGTGTCTGGGCCCCCCCCCCCGGGCCCCTCCTTCCTGCCCTCTCCTTCCGCTCCATGTCCGAGGGGCTGCAGTTGGCCAATAACAGTGCTCGCAACCTGGCTGCCTCACTGTGGACCGATGATGTCACTGTGGCCCTGGAGAGTGCCAAGAGTCTGAAGGTTGGCACAGTGTGGGTGAACTCTCACTCTCTGTTCGATGCTGCGGCCAGTTTTGGAGGAGTGAGGGAGTGTGGGAACACTACTGACGGAGGAAAAGAGggtctGTACCAggtggaCCGCTCCTATAAGCTGTATATCGGAGGTGTTCAGTGCCATCCGGAGGCTGGTTTCTATGGTGCCCGTGTGTCCGGAGGGGGCCCAGGGGGGCAGTACTGTCCAGTTGGGTCCAGGAAGGATGTCAGGAATGCTGTGGAGGCAGCAGACAAGGCCCAGCCTGGCAACCAGACTGGCCTCTCATTGGCTAAGGGTCAGGAGGAGGTGGATCTTTCTGTTGCTGCCGCCTTTGATTGGGCGTCACTCTGCGACAAGCTGGGAGGGACAATCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008973 True 2021 mRNA 0.55 13 16216538 16233132

Neighbor

gene id symbol gene type direction distance location
AMCG00008968 NA coding downstream 318372 15895688 ~ 15898166 (-)
AMCG00008961 NA coding downstream 359339 15853214 ~ 15857199 (-)
AMCG00008962 NA coding downstream 385909 15827700 ~ 15830629 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 415165 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 531488 15667816 ~ 15685050 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 40672 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 60184 16293316 ~ 16298256 (-)
AMCG00008976 LOC107551165 coding upstream 86236 16319368 ~ 16322631 (-)
AMCG00008975 NA coding upstream 103283 16336415 ~ 16338708 (-)
AMCG00008980 NA coding upstream 245656 16478788 ~ 16519566 (-)
G52915 NA non-coding downstream 1523 16208865 ~ 16215015 (-)
G52873 NA non-coding downstream 86187 16129281 ~ 16130351 (-)
G52866 NA non-coding downstream 90271 16124963 ~ 16126267 (-)
G52831 NA non-coding downstream 266207 15944798 ~ 15950331 (-)
G52814 NA non-coding downstream 276236 15940096 ~ 15940302 (-)
G52918 NA non-coding upstream 5626 16238758 ~ 16254139 (-)
G52929 NA non-coding upstream 78260 16311392 ~ 16313985 (-)
G52938 NA non-coding upstream 118880 16352012 ~ 16352300 (-)
G52944 NA non-coding upstream 129490 16362622 ~ 16362879 (-)
G52999 NA non-coding upstream 308136 16541268 ~ 16541555 (-)
AMCG00008971 NA other downstream 142603 16063554 ~ 16073935 (-)
G52834 NA other downstream 252921 15957667 ~ 15963617 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other downstream 364728 15834040 ~ 15851810 (-)
G52782 NA other downstream 378737 15836989 ~ 15837801 (-)
AMCG00008957 NA other downstream 577408 15603825 ~ 15639130 (-)
G52951 NA other upstream 171578 16404710 ~ 16405126 (-)
G53017 NA other upstream 380092 16613224 ~ 16614461 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other upstream 590663 16823795 ~ 16913299 (-)
AMCG00009001 NA other upstream 1491587 17724719 ~ 17747043 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other upstream 1635254 17868386 ~ 17868696 (-)

Expression


Co-expression Network