Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008978 |
| gene name | LOC108432681,LOC102199411,LOC102296518 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 16430817 ~ 16451251 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: ATP-sensitive inward rectifier potassium channel 11-like |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005242 | inward rectifier potassium channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008978 | True | 1299 | mRNA | 0.55 | 5 | 16430817 | 16451251 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008972 | NA | coding | upstream | 296757 | 16126141 ~ 16134060 (+) |
| AMCG00008969 | ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 | coding | upstream | 376292 | 16052549 ~ 16054525 (+) |
| AMCG00008970 | NA | coding | upstream | 438267 | 15992113 ~ 15992550 (+) |
| AMCG00008966 | NA | coding | upstream | 479792 | 15943157 ~ 15951025 (+) |
| AMCG00008967 | NA | coding | upstream | 498838 | 15931316 ~ 15931979 (+) |
| AMCG00008981 | NA | coding | downstream | 96366 | 16547617 ~ 16558958 (+) |
| AMCG00008979 | NA | coding | downstream | 109771 | 16561022 ~ 16564235 (+) |
| AMCG00008982 | NA | coding | downstream | 148409 | 16599660 ~ 16602244 (+) |
| AMCG00008984 | NA | coding | downstream | 208741 | 16659992 ~ 16671430 (+) |
| AMCG00008991 | NA | coding | downstream | 346823 | 16798074 ~ 16798529 (+) |
| G52946 | NA | non-coding | upstream | 34336 | 16396280 ~ 16396481 (+) |
| G52945 | NA | non-coding | upstream | 61403 | 16369172 ~ 16369414 (+) |
| G52933 | NA | non-coding | upstream | 86139 | 16344256 ~ 16344678 (+) |
| G52931 | NA | non-coding | upstream | 86741 | 16343016 ~ 16344076 (+) |
| G52896 | NA | non-coding | upstream | 110965 | 16311392 ~ 16319852 (+) |
| G53025 | LOC100846954,LOC107575789 | non-coding | downstream | 202942 | 16654193 ~ 16654923 (+) |
| G53069 | NA | non-coding | downstream | 384361 | 16835612 ~ 16858245 (+) |
| G53115 | NA | non-coding | downstream | 507262 | 16958513 ~ 16959031 (+) |
| G53128 | NA | non-coding | downstream | 558271 | 17009522 ~ 17009721 (+) |
| G53131 | NA | non-coding | downstream | 568434 | 17019685 ~ 17019964 (+) |
| G52942 | NA | other | upstream | 68306 | 16362102 ~ 16362511 (+) |
| AMCG00008965 | NA | other | upstream | 520666 | 15895430 ~ 15910151 (+) |
| AMCG00008960 | rps11,rs11 | other | upstream | 567147 | 15856224 ~ 15863670 (+) |
| AMCG00008931 | pp12c,LOC106564933 | other | upstream | 1409971 | 14982573 ~ 15020846 (+) |
| AMCG00008919 | zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 | other | upstream | 1619060 | 14807297 ~ 14811757 (+) |
| AMCG00008983 | NA | other | downstream | 128612 | 16579863 ~ 16587381 (+) |
| G53028 | NA | other | downstream | 221252 | 16672503 ~ 16673542 (+) |
| AMCG00008985 | NA | other | downstream | 228574 | 16679825 ~ 16726295 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | downstream | 280138 | 16731389 ~ 16737499 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | downstream | 295436 | 16746687 ~ 16750798 (+) |
