AMCG00008981


Basic Information

Item Value
gene id AMCG00008981
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16547617 ~ 16558958 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008981
ATGGGCCAGAGTGAGCAGCAGAACTGCACCCACAGGAATGATGTCAGCATCATTTGTACAGTTGCCTCCTTTCCTGGGCTCATGCAGCTGGTCGTACGGGCGCAGCTCTCCTCCTCCATGGTGCCGTGGCTGCCTTCCTCCATGTCATGGCTGGGGTCGGGTTCATCACTGCTGGAGTCGAGTTCATCCTTGTGTGACGAGAACCACCACCAGCCCATGAGCACCAGCGCTCCAGGTAATGCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008981 True 246 mRNA 0.58 3 16547617 16558958

Neighbor

gene id symbol gene type direction distance location
AMCG00008978 LOC108432681,LOC102199411,LOC102296518 coding upstream 96366 16430817 ~ 16451251 (+)
AMCG00008972 NA coding upstream 413557 16126141 ~ 16134060 (+)
AMCG00008969 ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 coding upstream 493092 16052549 ~ 16054525 (+)
AMCG00008970 NA coding upstream 555067 15992113 ~ 15992550 (+)
AMCG00008966 NA coding upstream 596592 15943157 ~ 15951025 (+)
AMCG00008979 NA coding downstream 2064 16561022 ~ 16564235 (+)
AMCG00008982 NA coding downstream 40702 16599660 ~ 16602244 (+)
AMCG00008984 NA coding downstream 101034 16659992 ~ 16671430 (+)
AMCG00008991 NA coding downstream 239116 16798074 ~ 16798529 (+)
AMCG00008990 NA coding downstream 240641 16799599 ~ 16842718 (+)
G52946 NA non-coding upstream 151136 16396280 ~ 16396481 (+)
G52945 NA non-coding upstream 178203 16369172 ~ 16369414 (+)
G52933 NA non-coding upstream 202939 16344256 ~ 16344678 (+)
G52931 NA non-coding upstream 203541 16343016 ~ 16344076 (+)
G52896 NA non-coding upstream 227765 16311392 ~ 16319852 (+)
G53025 LOC100846954,LOC107575789 non-coding downstream 95235 16654193 ~ 16654923 (+)
G53069 NA non-coding downstream 276654 16835612 ~ 16858245 (+)
G53115 NA non-coding downstream 399555 16958513 ~ 16959031 (+)
G53128 NA non-coding downstream 450564 17009522 ~ 17009721 (+)
G53131 NA non-coding downstream 460727 17019685 ~ 17019964 (+)
G52942 NA other upstream 185106 16362102 ~ 16362511 (+)
AMCG00008965 NA other upstream 637466 15895430 ~ 15910151 (+)
AMCG00008960 rps11,rs11 other upstream 683947 15856224 ~ 15863670 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 1526771 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 1735860 14807297 ~ 14811757 (+)
AMCG00008983 NA other downstream 20905 16579863 ~ 16587381 (+)
G53028 NA other downstream 113545 16672503 ~ 16673542 (+)
AMCG00008985 NA other downstream 120867 16679825 ~ 16726295 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other downstream 172431 16731389 ~ 16737499 (+)
AMCG00008986 shank1,LOC108427331 other downstream 187729 16746687 ~ 16750798 (+)

Expression


Co-expression Network