AMCG00008982


Basic Information

Item Value
gene id AMCG00008982
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16599660 ~ 16602244 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008982
TCTTGTCTTTTTCAGTGTTGGTCAGTGGAGTCATCTGTCAGAATCCAAAAGTGACTGTGTACCCCAAGTTCAACACCGTGTACACTGGGGACCCCCTCATTCTCTTTTGCAATGAGACACAGGCGGTCACCTGGGAGCACAATAATGTCCAGCTTGTGGGTCCACAGTCACAGCTGCTGCATATTGCTGCTGCCTCGATGAATGACAAtggcaattacagctgcatagTGGGAGGAATCGCCAGTAAGCCAATCACAATCGACGTTCAGAACTTCCTGCcttcagcctctctctctgtgcagccCTCTGACTGGGGCGTGGCATTCCACAAAGAGCATGTGAGCCTGCGCTGCGACCCCGAGGTTGGGGGCACAGATGGCTGGATTATCAAGATGTTCCAGGGGGGAGCAGCGCAGTGGAGGGTGAAGGGGTTGTTGGGGGTGGCGGGTGTGCTGGAGTACAGTGCAGAGATCAGCAAAACAACCACATACTGGTGTGAAGATAAGAACAACAGGAGCAACACAGTGACTGTCAGGAGCACagAAACAATGGTTGCCCTGGAGACCCCCCCTGGCCTCATATCCGTGGGTGACAGAGTGACTTTGGTGTGccgggtgtgggggggtgcaaaGATCTCACATGTGGTATTTCTGAAAGGGGAGGTGGAGAAGAAGATTGCCGCAGACTCACAGTACACCATAGAGAACGTGACCAAGACAGACAGAGGCAATTACTCCTGCAGGGCCACTTACAAattcccccaaaacaaaaatggagacAGCATtactgtgacctctgacccccagGAGCTCAGTGTCAcagACAGTCTTCCCCGAGCGATGCTGAGGATGGGGTCCGATGGCACACTGAGCTGCTCCTCTGAAGGCGGGCCAGCCAGAGCACAGGTGTTCCGCTGGTACCGGGAGCGGCGGGTCATGCCAGACGAGAACCAGGATACACTGACTGTGAAGTCCGGTGACAGGGGGACATGGTTCAGGTGCCGGGCAGTGTGGGACAAGGGCGTTTCTGCATTGAGCAACATGGTACACACAGAGCCTCAAGCCGGAACATCCATTGTCCTAGTTCTGGTTGTCGTGTTCATCCTGGTGTGTTGTGGGGGGGGCATTCTGGTTGTGGtgtggaagaggaagaggaggagtgAAGaGGCTTTGTATCAGGATATTCCTCTGGGAGGGGTGAAAGGAGGAGATacagaggagaaggagggaggaagaggagagggaggagggtaTGAGGAATTGAAGAGGGCgaaaggagagaaggagggggagtATCAGACGCTGGAACAGAAAAtgggagggaaagagggaggaggaggagcaggaggagggtATGAGGAATTGAAGCGGGcaagaggagagaaggaggaggagtaTCAGATGCTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008982 True 1409 mRNA 0.55 7 16599660 16602244

Neighbor

gene id symbol gene type direction distance location
AMCG00008979 NA coding upstream 35425 16561022 ~ 16564235 (+)
AMCG00008981 NA coding upstream 40702 16547617 ~ 16558958 (+)
AMCG00008978 LOC108432681,LOC102199411,LOC102296518 coding upstream 148409 16430817 ~ 16451251 (+)
AMCG00008972 NA coding upstream 465600 16126141 ~ 16134060 (+)
AMCG00008969 ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 coding upstream 545135 16052549 ~ 16054525 (+)
AMCG00008984 NA coding downstream 57748 16659992 ~ 16671430 (+)
AMCG00008991 NA coding downstream 195830 16798074 ~ 16798529 (+)
AMCG00008990 NA coding downstream 197355 16799599 ~ 16842718 (+)
AMCG00008993 NA coding downstream 558841 17161085 ~ 17161541 (+)
AMCG00008996 NA coding downstream 821202 17423446 ~ 17453217 (+)
G52946 NA non-coding upstream 203179 16396280 ~ 16396481 (+)
G52945 NA non-coding upstream 230246 16369172 ~ 16369414 (+)
G52933 NA non-coding upstream 254982 16344256 ~ 16344678 (+)
G52931 NA non-coding upstream 255584 16343016 ~ 16344076 (+)
G52896 NA non-coding upstream 279808 16311392 ~ 16319852 (+)
G53025 LOC100846954,LOC107575789 non-coding downstream 51949 16654193 ~ 16654923 (+)
G53069 NA non-coding downstream 233368 16835612 ~ 16858245 (+)
G53115 NA non-coding downstream 356269 16958513 ~ 16959031 (+)
G53128 NA non-coding downstream 407278 17009522 ~ 17009721 (+)
G53131 NA non-coding downstream 417441 17019685 ~ 17019964 (+)
AMCG00008983 NA other upstream 12279 16579863 ~ 16587381 (+)
G52942 NA other upstream 237149 16362102 ~ 16362511 (+)
AMCG00008965 NA other upstream 689509 15895430 ~ 15910151 (+)
AMCG00008960 rps11,rs11 other upstream 735990 15856224 ~ 15863670 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 1578814 14982573 ~ 15020846 (+)
G53028 NA other downstream 70259 16672503 ~ 16673542 (+)
AMCG00008985 NA other downstream 77581 16679825 ~ 16726295 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other downstream 129145 16731389 ~ 16737499 (+)
AMCG00008986 shank1,LOC108427331 other downstream 144443 16746687 ~ 16750798 (+)
AMCG00008995 NA other downstream 728648 17330892 ~ 17343676 (+)

Expression


Co-expression Network