Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008994 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 17205090 ~ 17220441 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060041 | retina development in camera-type eye | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008994 | True | 405 | mRNA | 0.56 | 4 | 17205090 | 17220441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008992 | NA | coding | downstream | 215664 | 16970232 ~ 16989426 (-) |
| AMCG00008987 | NA | coding | downstream | 421068 | 16782779 ~ 16784022 (-) |
| AMCG00008980 | NA | coding | downstream | 685524 | 16478788 ~ 16519566 (-) |
| AMCG00008975 | NA | coding | downstream | 866382 | 16336415 ~ 16338708 (-) |
| AMCG00008976 | LOC107551165 | coding | downstream | 882459 | 16319368 ~ 16322631 (-) |
| AMCG00008998 | scaf1,phrf1,LOC107580000 | coding | upstream | 381391 | 17601832 ~ 17611358 (-) |
| AMCG00009000 | NA | coding | upstream | 395287 | 17615728 ~ 17626783 (-) |
| AMCG00008999 | NA | coding | upstream | 435154 | 17655595 ~ 17664736 (-) |
| AMCG00009015 | NA | coding | upstream | 930422 | 18150863 ~ 18151365 (-) |
| AMCG00009012 | NA | coding | upstream | 955454 | 18175895 ~ 18208537 (-) |
| G53156 | NA | non-coding | downstream | 95379 | 17109061 ~ 17109711 (-) |
| G53147 | NA | non-coding | downstream | 123025 | 17081678 ~ 17082065 (-) |
| G53142 | NA | non-coding | downstream | 143539 | 17060808 ~ 17061551 (-) |
| G53134 | NA | non-coding | downstream | 164410 | 17040107 ~ 17040680 (-) |
| G53127 | NA | non-coding | downstream | 202872 | 17002010 ~ 17002218 (-) |
| G53188 | NA | non-coding | upstream | 123001 | 17343442 ~ 17343782 (-) |
| G53286 | NA | non-coding | upstream | 433684 | 17654125 ~ 17655208 (-) |
| G53411 | NA | non-coding | upstream | 863806 | 18084247 ~ 18084482 (-) |
| G53425 | NA | non-coding | upstream | 882281 | 18102722 ~ 18113638 (-) |
| G53428 | NA | non-coding | upstream | 911039 | 18131480 ~ 18131785 (-) |
| AMCG00008989 | prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 | other | downstream | 291791 | 16823795 ~ 16913299 (-) |
| G53017 | NA | other | downstream | 590629 | 16613224 ~ 16614461 (-) |
| G52951 | NA | other | downstream | 799964 | 16404710 ~ 16405126 (-) |
| AMCG00008971 | NA | other | downstream | 1131155 | 16063554 ~ 16073935 (-) |
| G52834 | NA | other | downstream | 1241473 | 15957667 ~ 15963617 (-) |
| AMCG00009001 | NA | other | upstream | 504278 | 17724719 ~ 17747043 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | upstream | 647945 | 17868386 ~ 17868696 (-) |
| AMCG00009029 | NA | other | upstream | 2740586 | 19961027 ~ 19970276 (-) |
| AMCG00009027 | NA | other | upstream | 2841083 | 20061524 ~ 20062179 (-) |
| G53809 | NA | other | upstream | 2959358 | 20179799 ~ 20271814 (-) |
