AMCG00009005


Basic Information

Item Value
gene id AMCG00009005
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 17819600 ~ 17829383 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009005
ATGGGGGCCGGGCTAAAGAGTTTTGGGCAACAAACTGTGGCCCAACCCCCGGTGACTCAAGCGATGGGGCAATGCGAGGGAAGCAAAAAGGAGGCAGCAGCGGCACCTACTGAGGTCCTGAGCGGGGGGCGCTACTACTGGGAGGTGCAGTGGACTGGCTGGGTGGTGGTGGGTGTAGCCTTCCTCTCCCTCAGTCGCAAGGGGGAGAATGGGACATGTGGCCTGGGGGAGAACACAAAGTCCTGGGGCTTGGGCTGGGCTGGCTCCAGCTACCACGCTTGGCACAATGGGGAGCTGACTGACGTCACTGGGGTGCCCCGGGCGTCACAGCTTGGGGTATATCTGGACCAGCCAGCTGGCCTACTGGCTTTCTACTGCCTGAAGGgaggggtggaggagggggaggcagGGGAGGAGGCAGAGGTAGGGGTGGAGAGGGAGGCTGTGCTTCTGCACAAGTTCAAGGCCTCGTTCACAGAGCCACTGTTGCCTGGTTTCTGGGTGGGCAGTAACTCCTCCTGCACGCTGCTGAggagcgagtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009005 True 543 mRNA 0.62 3 17819600 17829383

Neighbor

gene id symbol gene type direction distance location
AMCG00009003 NA coding upstream 23303 17788520 ~ 17796297 (+)
AMCG00008997 NA coding upstream 218582 17492481 ~ 17601018 (+)
AMCG00008996 NA coding upstream 366383 17423446 ~ 17453217 (+)
AMCG00008993 NA coding upstream 658059 17161085 ~ 17161541 (+)
AMCG00008990 NA coding upstream 976882 16799599 ~ 16842718 (+)
AMCG00009004 med25,LOC106601541,LOC106601511 coding downstream 2560 17831943 ~ 17845668 (+)
AMCG00009002 LOC103358380 coding downstream 34426 17863809 ~ 17868958 (+)
AMCG00009007 NA coding downstream 69695 17899078 ~ 17915696 (+)
AMCG00009010 NA coding downstream 146651 17976034 ~ 18004741 (+)
AMCG00009008 NA coding downstream 184323 18013706 ~ 18022319 (+)
G53300 NA non-coding upstream 72664 17740544 ~ 17746936 (+)
G53299 NA non-coding upstream 82676 17736590 ~ 17736924 (+)
G53288 NA non-coding upstream 84784 17732614 ~ 17734816 (+)
G53290 NA non-coding upstream 133840 17674614 ~ 17685760 (+)
G53255 NA non-coding upstream 181226 17638161 ~ 17638374 (+)
G53352 NA non-coding downstream 39613 17868996 ~ 17870467 (+)
G53354 NA non-coding downstream 41124 17870507 ~ 17871066 (+)
G53353 NA non-coding downstream 42046 17871429 ~ 17872667 (+)
G53358 NA non-coding downstream 43419 17872802 ~ 17874655 (+)
G53366 NA non-coding downstream 55098 17884481 ~ 17884687 (+)
G53298 mybpc2 other upstream 88940 17729366 ~ 17730660 (+)
AMCG00008995 NA other upstream 475924 17330892 ~ 17343676 (+)
AMCG00008986 shank1,LOC108427331 other upstream 1068802 16746687 ~ 16750798 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other upstream 1082101 16731389 ~ 16737499 (+)
AMCG00008985 NA other upstream 1093305 16679825 ~ 16726295 (+)
AMCG00009009 NA other downstream 88165 17917548 ~ 17920592 (+)
G53520 NA other downstream 721389 18550772 ~ 18553960 (+)
AMCG00009022 dnajc19,LOC107727073 other downstream 1698514 19527897 ~ 19547507 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other downstream 2547412 20376795 ~ 20396356 (+)
G53911 NA other downstream 3338848 21168231 ~ 21168575 (+)

Expression


Co-expression Network