AMCG00009013


Basic Information

Item Value
gene id AMCG00009013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 18223847 ~ 18253002 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009013
ATCATCATGTTAAACTCAGTTTCAGATTTACATGGGTATATCGATAAAGCCCAGCTAACTTGTGAACTTGGGGGAAACCTGGAGTACTGTCACAGCCAGTGGATTCATCACCGAACTGGGAAATCAAACCTAAAGATTGCAAACTCAGAGAAGCAACCACTGTCTATACATGTCTATATGGTAGAGCTTATTGCTTTGCAAACTAAAAGTAAGATCTCAAATCCCATGTCCTTGTCTGTCAACCATTGCTGGGTGGCTCTGCAGGCCATAGAAAACTTTGCTGTGATAGTGAAGAGCACTACTCGGATGCTGCAGAGATTTGGAACCAGTCTGTCTGAGACGGAGCTCCCGAATGAAGTGCAATGCACCCAGGACCTTCTCGCCACCCAAATAGCGAAACATGACAAGCTTAAGGATGAACTAAAACTGGCAATGAAACAAGGAATGACTTTGCTCTCTTATATAAAAGATCTAGCAACACAAAATGCCAACTGTAAGCTGAACCCAGACGAGCTGGAGAATGTTAAAGTGGCTCTGGACAGCCTAATGGAGATTCTGGCTGCTTTCTCAAACATTGGAGATGGCGTAGCTCAAGTGGAACACCTTTTGAGAGAGTTGAAGTCTCTGGAGGAGAGAGCCCAGGAGTCTCAGGAAAAAGCTCAGCTGTACGCCCTACATGGAGACCAGCTTATCCAGAGCAATCACTACGCCGTTGACTCCATCAGACCCAAGTGTGTAGAGCTGCGCCGGATCTGCGATGACTTTACCAATGGAGCAAAAAAGAAATATGATATACTGGGGAAGTCCTATGAAATCCATAAAAGAATAGACGagGTGACCCAGTGGTGTGAGTCTGGTGTATATCTGCTAGCCTCCCAGGCAGTGGACAAGTGCCAGTCACAGGAGGGAGCAGAGGCTGCGCTGCATGACATCGAAGCCTTCCTGGAAACAGCCCAGGAGAGTGTGCTTGGAGACCTCAAGGACCTCCACAACCAGTATGAAATTATCCTGACCCCGCAGGTCAAGGCTCATGTGCAGAAGATGCTACAGAGGCTGGAGGATGTGCAGGAGATGTTTGAAAAGAGGCAGGTCAGTCTGAAAAAGCTGTCAGCCAAACAGACACGTCCAGTGCAGCCTGTTGCCCCCCGGCCTGAGTCCTCTCCGAAACGTGCTTCTCCCAAAACACCCAGGACCTCCGGATCCACACCAAATCACAAAAGTCTGGAAATCAATTGCACCCCCAAACAACCCACAGAAACAGAAGTGGCCAAaaagaagaacataaaaaaaactaaaggagGAATCAAGATTGAGGTGATGCACAGAGCTAGCCAAGGTGGATCTAGTCACATCCTGATAACAAGTGAGACCGAGGAAAGCTTGACAAACAGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009013 True 1395 mRNA 0.48 9 18223847 18253002

Neighbor

gene id symbol gene type direction distance location
AMCG00009012 NA coding downstream 15310 18175895 ~ 18208537 (-)
AMCG00009015 NA coding downstream 72482 18150863 ~ 18151365 (-)
AMCG00008999 NA coding downstream 559111 17655595 ~ 17664736 (-)
AMCG00009000 NA coding downstream 597064 17615728 ~ 17626783 (-)
AMCG00008998 scaf1,phrf1,LOC107580000 coding downstream 612489 17601832 ~ 17611358 (-)
AMCG00009011 LOC105011705,LOC106613920 coding upstream 19616 18272618 ~ 18288172 (-)
AMCG00009018 eif4a2,LOC107103884,LOC107593804 coding upstream 124432 18377434 ~ 18382391 (-)
AMCG00009019 eif4a2,LOC105889495,LOC107568626 coding upstream 143175 18396177 ~ 18402246 (-)
AMCG00009017 NA coding upstream 151512 18404514 ~ 18410122 (-)
AMCG00009020 NA coding upstream 219632 18472634 ~ 18473701 (-)
G53428 NA non-coding downstream 92062 18131480 ~ 18131785 (-)
G53425 NA non-coding downstream 110209 18102722 ~ 18113638 (-)
G53411 NA non-coding downstream 139365 18084247 ~ 18084482 (-)
G53286 NA non-coding downstream 568639 17654125 ~ 17655208 (-)
G53188 NA non-coding downstream 880065 17343442 ~ 17343782 (-)
G53478 NA non-coding upstream 54435 18307437 ~ 18307999 (-)
G53543 NA non-coding upstream 348711 18601713 ~ 18601951 (-)
G53556 NA non-coding upstream 406349 18659351 ~ 18659633 (-)
G53568 NA non-coding upstream 469108 18722110 ~ 18722374 (-)
G53577 NA non-coding upstream 582134 18835136 ~ 18835373 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other downstream 355151 17868386 ~ 17868696 (-)
AMCG00009001 NA other downstream 476804 17724719 ~ 17747043 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 1310548 16823795 ~ 16913299 (-)
G53017 NA other downstream 1609386 16613224 ~ 16614461 (-)
G52951 NA other downstream 1818721 16404710 ~ 16405126 (-)
AMCG00009029 NA other upstream 1708025 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 1808522 20061524 ~ 20062179 (-)
G53809 NA other upstream 1926797 20179799 ~ 20271814 (-)
G54003 LOC107575789 other upstream 3930086 22183088 ~ 22183565 (-)
AMCG00009060 hltf other upstream 5572227 23825229 ~ 23863035 (-)

Expression


Co-expression Network