Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009014 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 18219072 ~ 18220253 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K03766 | B3GNT5; beta-1,3-N-acetylglucosaminyltransferase 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009014 | True | 993 | mRNA | 0.53 | 2 | 18219072 | 18220253 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009006 | ect2,LOC107593151 | coding | upstream | 178111 | 18036794 ~ 18040961 (+) |
| AMCG00009008 | NA | coding | upstream | 196753 | 18013706 ~ 18022319 (+) |
| AMCG00009010 | NA | coding | upstream | 214331 | 17976034 ~ 18004741 (+) |
| AMCG00009007 | NA | coding | upstream | 303376 | 17899078 ~ 17915696 (+) |
| AMCG00009002 | LOC103358380 | coding | upstream | 350114 | 17863809 ~ 17868958 (+) |
| AMCG00009016 | rfc4,LOC103355474 | coding | downstream | 141273 | 18361526 ~ 18374268 (+) |
| AMCG00009026 | LOC107550661,LOC107566880 | coding | downstream | 1641025 | 19861278 ~ 19915906 (+) |
| AMCG00009025 | atp11b | coding | downstream | 1718823 | 19939076 ~ 19949435 (+) |
| AMCG00009032 | NA | coding | downstream | 2042822 | 20263075 ~ 20263866 (+) |
| AMCG00009034 | nlgn1 | coding | downstream | 2236204 | 20456457 ~ 20461014 (+) |
| G53415 | NA | non-coding | upstream | 119425 | 18099016 ~ 18099647 (+) |
| G53414 | NA | non-coding | upstream | 120521 | 18096230 ~ 18098551 (+) |
| G53410 | NA | non-coding | upstream | 134542 | 18084318 ~ 18084530 (+) |
| G53409 | NA | non-coding | upstream | 135034 | 18083804 ~ 18084038 (+) |
| G53406 | NA | non-coding | upstream | 141194 | 18077671 ~ 18077878 (+) |
| G53451 | LOC100846954 | non-coding | downstream | 139170 | 18359423 ~ 18398807 (+) |
| G53454 | NA | non-coding | downstream | 168146 | 18388399 ~ 18389424 (+) |
| G53456 | NA | non-coding | downstream | 179109 | 18399362 ~ 18400842 (+) |
| G53458 | eif4a2,LOC105889495,LOC107656867,LOC107568626,LOC108267852 | non-coding | downstream | 181252 | 18401505 ~ 18402219 (+) |
| G53493 | NA | non-coding | downstream | 188673 | 18408926 ~ 18410130 (+) |
| AMCG00009009 | NA | other | upstream | 298480 | 17917548 ~ 17920592 (+) |
| G53298 | mybpc2 | other | upstream | 488412 | 17729366 ~ 17730660 (+) |
| AMCG00008995 | NA | other | upstream | 875396 | 17330892 ~ 17343676 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | upstream | 1468274 | 16746687 ~ 16750798 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | upstream | 1481573 | 16731389 ~ 16737499 (+) |
| G53520 | NA | other | downstream | 330519 | 18550772 ~ 18553960 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 1307644 | 19527897 ~ 19547507 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 2156542 | 20376795 ~ 20396356 (+) |
| G53911 | NA | other | downstream | 2947978 | 21168231 ~ 21168575 (+) |
| G53915 | NA | other | downstream | 3054358 | 21274611 ~ 21275354 (+) |
