AMCG00009023


Basic Information

Item Value
gene id AMCG00009023
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19722941 ~ 19728530 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009023
ctGGAGTAAAGGATATGGATCGCTACCATGGGAAGCTGACTGTGTCACTGTACAGCTcttctctctcacctcagctGTCAAACTTGAAGCTGGGCATTATAAGTAGTGATGAAATGCCTGTCCATTACAGgCACTCTGTTAGTACTGCGTGCTCTTCACACACTTTTGACAGTGTTCTGCAGCATACACTAGGGTTTGCCAATCCAGCTACGGTGGAGTTTCTTTTGGGAAAGCTGGAAATTGGTGAAACAGAACCTCCTTCATTGATGAGGGGCTTACAGAGGTATGCTACAAAGGGCAGCCTGACTAAGGCGATAGATGACTTTGAGCTGGCACTGGAGAGCTGTCCGACGCacagaaatgcaagaaaataccTCTGCCAGACTTTAGTTGAAAGGGGTGGCCAGttggaagaagaagagaagCTGGTGACAGCAGAACATTTGTACAGAAAGGCTTTGACTTTAGATGACACTTTCCAGGAGGCAGATGAAGCTCTGAAGAAACTACAGCAGCACATCCAGAAATCCCTGAAACTGAAAGAAGAGGAGGCAGCAAAAGAAAAGGATCAATCTAAAATTGTGGTGACAAGTGCAGAGAAATTACGTAAGATattaaaagaagagaaaagaatgaaaagaaaaaagaggaagttgacatcatcgtcatcatcctcctcctcattcAGCAAGTCTTCAgactccttggtttcttctgcTGACCACAGGAAGGTTAAgaataggaaacaaaagcagCGAGACTCCCCTGGCAGCCGGTGGAAGGCTTGTCGAAGGAGCTCCACACACCAAGACAAGAGCTATGAGAGCAAGGAAGAGTGGTACCCTCCTCCGGCAAACACATCTGCATCATTCTTGAATCAAAAGTATGAGGTGTCTAAATTTCCTGAGGGGCAAGACAGGTCAGTAGAATATAAGTCTCAGGCGAAGGATAGACGATATCACTCTCTTTCCTCATCTTCTGTGGAGATCTTAGATGATGGTGGAGGTAGGTTTGATGAACATTGTTTTCAGGGTGTTCCAGTCAAAGCAGAGAGGAGCAAAGCAAAGGTTAAAAAAGGTGGACGTAAATCTTGCCCTTCCTGCATGGATGATTCTGTGAAACCTCGTGACAGGAAATCAAGTGGCATAGAGAAAGAGGTTGCAAAAGAAtacaggagagaggaggaggaaagtAATTTTCAGCTGGAGTTCTGTAGTGGATTAGAGAAAATAAGACCTAGAAAGtattcctcctcctctgcaGGTTCAGAGTATTCCCACAAATCTGACAGATATGTTAACACAAAAGACTATTCTTCCCAGGGATGTAGTAACAGCAGATCAAACAGTGACAGGTATGATTCTGTAGGAATTGGAGATAAGAAACAGGCCTATCAAATAGAAGAAGAGGTGCAAAATTTTAGAAGATCTGACAGACATGAAAGCAGATTATCAAAGCACAGACTCCACAATGATAAGGAGTCTGCTGAAGCGAAAAGAAATCTGCCATCAAACCTGCTTGACATATTTAGCCAGATTGCAgagtttgaaaaggaaaaatgtacCAATTcgaaaaaagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009023 True 1580 mRNA 0.43 6 19722941 19728530

Neighbor

gene id symbol gene type direction distance location
AMCG00009021 sox2,LOC106584342,LOC107655276 coding downstream 461830 19260287 ~ 19261111 (-)
AMCG00009020 NA coding downstream 1249240 18472634 ~ 18473701 (-)
AMCG00009017 NA coding downstream 1312819 18404514 ~ 18410122 (-)
AMCG00009019 eif4a2,LOC105889495,LOC107568626 coding downstream 1320695 18396177 ~ 18402246 (-)
AMCG00009018 eif4a2,LOC107103884,LOC107593804 coding downstream 1340550 18377434 ~ 18382391 (-)
AMCG00009024 NA coding upstream 10758 19739288 ~ 19739999 (-)
AMCG00009028 dcun1d1,LOC107656862,LOC107722250,LOC107568628 coding upstream 242985 19971515 ~ 20010245 (-)
AMCG00009030 NA coding upstream 380416 20108946 ~ 20110200 (-)
AMCG00009031 NA coding upstream 419567 20148097 ~ 20150492 (-)
AMCG00009037 NA coding upstream 1012761 20741291 ~ 20741486 (-)
G53668 NA non-coding downstream 100739 19621812 ~ 19622202 (-)
G53662 NA non-coding downstream 152881 19569823 ~ 19570060 (-)
G53632 NA non-coding downstream 371129 19351464 ~ 19351812 (-)
G53629 NA non-coding downstream 374913 19347785 ~ 19348028 (-)
G53623 NA non-coding downstream 433921 19229214 ~ 19289020 (-)
G53722 NA non-coding upstream 131289 19859819 ~ 19937442 (-)
G53746 NA non-coding upstream 228183 19956713 ~ 19958285 (-)
G53748 NA non-coding upstream 231043 19959573 ~ 19960354 (-)
G53751 NA non-coding upstream 264503 19993033 ~ 19993252 (-)
G53752 NA non-coding upstream 277359 20005889 ~ 20006091 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other downstream 1854245 17868386 ~ 17868696 (-)
AMCG00009001 NA other downstream 1975898 17724719 ~ 17747043 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 2809642 16823795 ~ 16913299 (-)
G53017 NA other downstream 3108480 16613224 ~ 16614461 (-)
G52951 NA other downstream 3317815 16404710 ~ 16405126 (-)
AMCG00009029 NA other upstream 232497 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 332994 20061524 ~ 20062179 (-)
G53809 NA other upstream 451269 20179799 ~ 20271814 (-)
G54003 LOC107575789 other upstream 2454558 22183088 ~ 22183565 (-)
AMCG00009060 hltf other upstream 4096699 23825229 ~ 23863035 (-)

Expression


Co-expression Network