Item | Value |
---|---|
gene id | AMCG00009025 |
gene name | atp11b |
gene type | coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030126.1 |
NCBI id | CM030126.1 |
chromosome length | 46242406 |
location | 19939076 ~ 19949435 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
symbol | description |
---|---|
atp11b | Predicted to enable ATP binding activity; ATPase-coupled intramembrane lipid transporter activity; and magnesium ion binding activity. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in head; inner ear; swim bladder; and ventricular system. Orthologous to human ATP11B (ATPase phospholipid transporting 11B (putative)). |
description |
---|
PREDICTED: probable phospholipid-transporting ATPase IF isoform X3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00009025 | True | 384 | mRNA | 0.47 | 3 | 19939076 | 19949435 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00009026 | LOC107550661,LOC107566880 | coding | upstream | 23170 | 19861278 ~ 19915906 (+) |
AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 1564808 | 18361526 ~ 18374268 (+) |
AMCG00009014 | NA | coding | upstream | 1718823 | 18219072 ~ 18220253 (+) |
AMCG00009006 | ect2,LOC107593151 | coding | upstream | 1898115 | 18036794 ~ 18040961 (+) |
AMCG00009008 | NA | coding | upstream | 1916757 | 18013706 ~ 18022319 (+) |
AMCG00009032 | NA | coding | downstream | 313640 | 20263075 ~ 20263866 (+) |
AMCG00009034 | nlgn1 | coding | downstream | 507022 | 20456457 ~ 20461014 (+) |
AMCG00009035 | nlgn1,LOC106584306 | coding | downstream | 736710 | 20686145 ~ 20692387 (+) |
AMCG00009038 | NA | coding | downstream | 1048463 | 20997898 ~ 21087025 (+) |
AMCG00009042 | NA | coding | downstream | 2480905 | 22430340 ~ 22441467 (+) |
G53695 | NA | non-coding | upstream | 118147 | 19820579 ~ 19820929 (+) |
G53675 | NA | non-coding | upstream | 256849 | 19681974 ~ 19682227 (+) |
G53663 | NA | non-coding | upstream | 361169 | 19577320 ~ 19577907 (+) |
G53645 | NA | non-coding | upstream | 449792 | 19489083 ~ 19489284 (+) |
G53631 | NA | non-coding | upstream | 587277 | 19351535 ~ 19351799 (+) |
G53706 | NA | non-coding | downstream | 10138 | 19959573 ~ 19960355 (+) |
G53711 | LOC107656862,LOC107568628,LOC107722250,LOC107708830,LOC107578399,LOC107681826 | non-coding | downstream | 34434 | 19983869 ~ 19985883 (+) |
G53762 | NA | non-coding | downstream | 79859 | 20029294 ~ 20030004 (+) |
G53764 | NA | non-coding | downstream | 80721 | 20030156 ~ 20030431 (+) |
G53791 | NA | non-coding | downstream | 154345 | 20103780 ~ 20104000 (+) |
AMCG00009022 | dnajc19,LOC107727073 | other | upstream | 391569 | 19527897 ~ 19547507 (+) |
G53520 | NA | other | upstream | 1385116 | 18550772 ~ 18553960 (+) |
AMCG00009009 | NA | other | upstream | 2018484 | 17917548 ~ 17920592 (+) |
G53298 | mybpc2 | other | upstream | 2208416 | 17729366 ~ 17730660 (+) |
AMCG00008995 | NA | other | upstream | 2595400 | 17330892 ~ 17343676 (+) |
AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 427360 | 20376795 ~ 20396356 (+) |
G53911 | NA | other | downstream | 1218796 | 21168231 ~ 21168575 (+) |
G53915 | NA | other | downstream | 1325176 | 21274611 ~ 21275354 (+) |
G53917 | NA | other | downstream | 1342806 | 21292241 ~ 21293901 (+) |
G54263 | NA | other | downstream | 3933882 | 23883317 ~ 23975906 (+) |