Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009027 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 20061524 ~ 20062179 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009027 | False | 207 | mRNA | 0.51 | 2 | 20061524 | 20062114 |
| TU67252 | True | 269 | lncRNA | 0.52 | 2 | 20061527 | 20062179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009028 | dcun1d1,LOC107656862,LOC107722250,LOC107568628 | coding | downstream | 51279 | 19971515 ~ 20010245 (-) |
| AMCG00009024 | NA | coding | downstream | 321525 | 19739288 ~ 19739999 (-) |
| AMCG00009023 | NA | coding | downstream | 332994 | 19722941 ~ 19728530 (-) |
| AMCG00009021 | sox2,LOC106584342,LOC107655276 | coding | downstream | 800413 | 19260287 ~ 19261111 (-) |
| AMCG00009020 | NA | coding | downstream | 1587823 | 18472634 ~ 18473701 (-) |
| AMCG00009030 | NA | coding | upstream | 46767 | 20108946 ~ 20110200 (-) |
| AMCG00009031 | NA | coding | upstream | 85918 | 20148097 ~ 20150492 (-) |
| AMCG00009037 | NA | coding | upstream | 679112 | 20741291 ~ 20741486 (-) |
| AMCG00009036 | NA | coding | upstream | 679314 | 20741493 ~ 20742332 (-) |
| AMCG00009040 | NA | coding | upstream | 1232145 | 21294324 ~ 21295469 (-) |
| G53752 | NA | non-coding | downstream | 55433 | 20005889 ~ 20006091 (-) |
| G53751 | NA | non-coding | downstream | 68272 | 19993033 ~ 19993252 (-) |
| G53748 | NA | non-coding | downstream | 101170 | 19959573 ~ 19960354 (-) |
| G53746 | NA | non-coding | downstream | 103239 | 19956713 ~ 19958285 (-) |
| G53722 | NA | non-coding | downstream | 124082 | 19859819 ~ 19937442 (-) |
| G53776 | NA | non-coding | upstream | 6732 | 20068911 ~ 20070175 (-) |
| G53790 | NA | non-coding | upstream | 37568 | 20099747 ~ 20100015 (-) |
| G53849 | LOC100846954 | non-coding | upstream | 523809 | 20585988 ~ 20586203 (-) |
| G53899 | NA | non-coding | upstream | 1000894 | 21063073 ~ 21063351 (-) |
| G53916 | NA | non-coding | upstream | 1212551 | 21274730 ~ 21275341 (-) |
| AMCG00009029 | NA | other | downstream | 91248 | 19961027 ~ 19970276 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | downstream | 2192828 | 17868386 ~ 17868696 (-) |
| AMCG00009001 | NA | other | downstream | 2314481 | 17724719 ~ 17747043 (-) |
| AMCG00008989 | prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 | other | downstream | 3148225 | 16823795 ~ 16913299 (-) |
| G53017 | NA | other | downstream | 3447063 | 16613224 ~ 16614461 (-) |
| G53809 | NA | other | upstream | 117620 | 20179799 ~ 20271814 (-) |
| G54003 | LOC107575789 | other | upstream | 2120909 | 22183088 ~ 22183565 (-) |
| AMCG00009060 | hltf | other | upstream | 3763050 | 23825229 ~ 23863035 (-) |
| G54544 | NA | other | upstream | 5091087 | 25153266 ~ 25156338 (-) |
| AMCG00009100 | NA | other | upstream | 5111498 | 25173677 ~ 25176378 (-) |
